Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2747 |
Symbol | infC |
ID | 5198102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3033467 |
End bp | 3033976 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640582300 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001263240 |
Protein GI | 148555658 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.128829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTCA ATGGCCCGCG CTATAATGAG TTCATCCAGT CGCCCAAGGT CCGGGTGATC GATGAAGAGG GCGAGAATCT GGGCGTGATG TATACGCGCG AGGCGATCGA GCAGGCCCAG GAGGCCGGGC TCGACCTGGT CGAGGTGTCC CCGAACGCCG ATCCGCCCGT GTGCAAGTTC CTCGATGTCG GCAAGTTCAA GTACGAGGCC CAGAAAAAGG CCAATCTTGC CCGGAAGTCG CAGAAGACGC AGGAGATCAA GGAGATCAAG ATGCGTCCGA ACATCGACGA CCACGACTAT GAAACCAAGA TGAAGAAGAT CCACGAGTTC ATCGACGAGG GCGACAAGGT GAAGGTCACC CTGCGCTTCC GCGGTCGCGA GCTCGCGCAC GGCCAGCTCG GCATGCAGGT CCTCCAGCGC GTCCAGGCCG ACATGGCCGA GACCGCCAAG GTCGAGCAGT TCCCGCGCAT GGAAGGCCGC CAGATGCTGA TGGTGATCGC GCCGAAGTAA
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Protein sequence | MPLNGPRYNE FIQSPKVRVI DEEGENLGVM YTREAIEQAQ EAGLDLVEVS PNADPPVCKF LDVGKFKYEA QKKANLARKS QKTQEIKEIK MRPNIDDHDY ETKMKKIHEF IDEGDKVKVT LRFRGRELAH GQLGMQVLQR VQADMAETAK VEQFPRMEGR QMLMVIAPK
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