| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2744 |
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| Symbol | |
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| ID | 5196992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3029564 |
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| End bp | 3030511 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582297 |
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| Product | hypothetical protein |
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| Protein accession | YP_001263237 |
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| Protein GI | 148555655 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0811657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCC GGTCGAACCA TGTGCTGGTG GGCGGCGTCG TCCTCGCCCT GCTGGTCGCG
CTGCTCGTCT TCATCGTCTG GCTGGCGGGG TTCAACACCG CGAGCAACCA GCGCTACGAC
ATCTTCTTCA AGACCTCGGT CGACGGGCTC GCCAAGGGAT CGCCGGTCAA TTTCTCGGGC
GTGCCGGTCG GCAAGATCGA GGAGATCAAG CTGCTGCCCG ACAGCCCGGA GTTCGTCCGC
GTCCGCATCG CGATCGACCA GGACACGCCG ATCCTGCAGG GCACCACCGC GACGATCGCC
GGCATCGGCT TCACCGGGGT CAGCCAGATC AACCTCGACG GCGCGGTCAA GGGCGCGCCG
CCGATCACCG AGCCGGGGCC CTATGGCGAG CCGGTGATCC CGACCAAGCC GGGCGCGCTG
GGCGAACTGC TCAACTCGGC GCCCGAGCTG CTCAACCGCA TCTCGACCCT GACCGAGCGG
CTGACCGAGC TGCTCAACGA CAAGAACCAG AAGTCGATCA GCGGCATCCT CGCCCATGTC
GACAAGCTGT CGGGCGACCT CGCCGATCGC GGGCCCGAGA TCGCCGCCGC GGTCGTCCAG
CTCAAGACGA CGATGGAGCA GGCGGGCAAC GCCGCCGAGC GGGTCGGCCA GCTCGCCGAG
ACGACCAACG GGGTGATGGC CGACGACGTC AAGCCGGCGA TGGCGAACCT CAACAAGGCC
ACCGTCGCCG CCCAGCACAC GCTGGAGACG CTCGACGCGA CGATCACCGA CGCGCGGCCC
GGCATCAAGG CCTTCTCGAC CCAGACGGTG CCGCAGATCA ACCAGCTCGC GCGCAACCTG
GCCGAGATGT CGGAGGCGCT CGGCGCCATC TCGAACAAGC TCGACCGGGG CGGGGCGGGC
GCCGTGCTCG GCGGCTCCAA GCTGCCCGAC TACAAGCCAA GGAACTGA
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| Protein sequence | METRSNHVLV GGVVLALLVA LLVFIVWLAG FNTASNQRYD IFFKTSVDGL AKGSPVNFSG
VPVGKIEEIK LLPDSPEFVR VRIAIDQDTP ILQGTTATIA GIGFTGVSQI NLDGAVKGAP
PITEPGPYGE PVIPTKPGAL GELLNSAPEL LNRISTLTER LTELLNDKNQ KSISGILAHV
DKLSGDLADR GPEIAAAVVQ LKTTMEQAGN AAERVGQLAE TTNGVMADDV KPAMANLNKA
TVAAQHTLET LDATITDARP GIKAFSTQTV PQINQLARNL AEMSEALGAI SNKLDRGGAG
AVLGGSKLPD YKPRN
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