| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2743 |
|---|
| Symbol | |
|---|
| ID | 5196991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3028738 |
|---|
| End bp | 3029556 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640582296 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001263236 |
|---|
| Protein GI | 148555654 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.132977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGGC TCAACACCGC CGACGGCGAG ACCGTCATCC ATGTCGAGGG GCTGCGCAAC
GCCTTCGGCG AGCAGGTCGT CCATGACGGG CTCGACCTCG ATGTCCGGCG CGGCGAGATA
TTGGGCGTGG TCGGCGGATC GGGCACCGGC AAGTCGGTGC TGATGCGCTC GATCATCGGG
CTGCAGCCGC CCCAGGCGGG CATCGTCGAG GTGTTCGGCG AGCCGATGAT CGGCCGCGAC
GACTATGAGG CGCAGCAGGT CCGCCGCCGC TGGGGCGTGC TGTTCCAGGG CGGCGCGCTG
TTCTCGACCC TGACCGTGGC CGAGAATGTC CAGGTGCCGA TCCGCGAATA TTATCCGCAG
CTCGACGACC AGCTGCTCGA CGAGATCGCC GCCTACAAGG TCGCCATGTC GGGCCTGCCG
GCGGAGGCGG GGCCCAAATA TCCGTCCGAG CTGTCGGGCG GCATGCGCAA GCGCGCCGGC
CTCGCCCGCG CGCTGGCGCT CGACCCGCAG CTCCTGTTCC TCGACGAGCC GACCGCCGGG
CTCGACCCGA TCAGCGCCGC CGCCTTCGAC GCGCTGATCC GGTCGCTGCA ACGCACCCTC
GGCCTCACCG TCTTCCTGAT CACCCACGAC CTCGACACGC TGTACGCGAT CTGCGACCGC
GTCGCGGTGC TGGCGGACAG GCGCGTGATC GCGGTTGGAA CGATCCCGGA ACTATTGGCG
TTGGACCATC CGTGGATTCA GGAATATTTC AACGGCCCGC GGGGCCGGGT GGCGGCGGAG
GCCGCCGAGC GCGTGGCAGC GGGAGAAGCC GGGAAGTGA
|
|---|
| Protein sequence | MARLNTADGE TVIHVEGLRN AFGEQVVHDG LDLDVRRGEI LGVVGGSGTG KSVLMRSIIG
LQPPQAGIVE VFGEPMIGRD DYEAQQVRRR WGVLFQGGAL FSTLTVAENV QVPIREYYPQ
LDDQLLDEIA AYKVAMSGLP AEAGPKYPSE LSGGMRKRAG LARALALDPQ LLFLDEPTAG
LDPISAAAFD ALIRSLQRTL GLTVFLITHD LDTLYAICDR VAVLADRRVI AVGTIPELLA
LDHPWIQEYF NGPRGRVAAE AAERVAAGEA GK
|
|---|
| |