| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2741 |
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| Symbol | |
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| ID | 5196989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3026863 |
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| End bp | 3027534 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582294 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001263234 |
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| Protein GI | 148555652 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0707173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAC TCGCCATCTA CGACATGGAC CGCACGATCA CGCGGACCGG GACCTTCACC
CCGTTCATGA TCCACGCCGC GCTGCGGCTG GCGCCGTGGC GGCTGGTCTT CGTGCCCTTC
GCGGCGCTGG TGATGCTCGC CTATGTGGCG AAGCTGATCG AGCGCAAGCG GGTCAAGGAG
CTCAACCAGG CGATGCTGAT CGGCCGGCGC ATCCATGCCG ACCGGCTGGC ACCGATCGCC
GAGAGCTTCG CCGACGCGGT GATGCGCCGC AACGTCCGCG CCGGGGCGAT CGAGAGCCTG
GCGGAGAATC GCGCTGCCGG CCGCCGCCTC GTCCTCGCCA CCGCCTCGTC GCGCATCTGG
GTCGAGCCGA TCGCCGCCCG GCTGGGCATG GATGACGTCG TCGCGACCGG CGCGATCCGC
GGCATCGACG ACTATGTCAG CCACAAGGTC GACGGCGAGA ATTGCTACGG CCCCGCCAAG
CTGCGCATGA TCGAGGCGTG GATGGGGCTG GAGGGACTCG ACCGCGCCCG GTGCCGCATC
CGCTTCTATT CCGACCATAT CTCCGACGTG CCGGTGCTCG CCTGGGCCGA CGAGGCGATC
GCCGCCAACC CCCATGCCGG CCTGCGCGAG GAAGCCCGCA AGCGCGGCTG GACGATCGTC
GACTGGGATT GA
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| Protein sequence | MTELAIYDMD RTITRTGTFT PFMIHAALRL APWRLVFVPF AALVMLAYVA KLIERKRVKE
LNQAMLIGRR IHADRLAPIA ESFADAVMRR NVRAGAIESL AENRAAGRRL VLATASSRIW
VEPIAARLGM DDVVATGAIR GIDDYVSHKV DGENCYGPAK LRMIEAWMGL EGLDRARCRI
RFYSDHISDV PVLAWADEAI AANPHAGLRE EARKRGWTIV DWD
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