Gene Swit_2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2738 
Symbol 
ID5197652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3025542 
End bp3026117 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content65% 
IMG OID640582291 
ProductCHAP domain-containing protein 
Protein accessionYP_001263231 
Protein GI148555649 
COG category[R] General function prediction only 
COG ID[COG3942] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0703712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGT TCCCTGCGCG CGTCTGTGAT GCCAGTCACA GGCTCACGGG ACGGGTGGGG 
AACTACCAGA TGACCAAAAC GATGCGCGCG ATTGTCGGTT CCATGCTGCT TGCATGCATG
ACTCTCGCGC CCACCGCGGC CAATGCGCAA ATGCTCCAGT GCGCACCCTT CGCCCGCATG
TTCTCCGGCA TCCAGCTGTT CGGCGCCGCC GCTTCCTGGT GGAACCAGTC GGTCGGCAAA
TATCTGCGCG GCGATACGCC GGCGGTCGGC GCGGTGCTGG TGTTCAAGGC GATCGGCTCG
ATGCGCTCGG GCCATGTCGC CACCGTCACC CAGGTCGTCA GCGACCGGGT CATCAAGATC
ACCCACGCCA ACTGGTCGAT CATCAACGGC CGCCGTGGCC AGGTCGAGCG CGACGTCACC
GTCGTCGACG CCTCGCCGAA CAACGACTGG AGCAAGGTGA AGGTCTGGTT CGCGCCGATC
GGCAAGGTCG GCAACACCGC CTATCCGGTC AACGGCTTCA TCTACAAGGA CGGCTCCAAG
TCGACCGCCG CCGCCGTCCA GGCCGTCCAG GGCTGA
 
Protein sequence
MPGFPARVCD ASHRLTGRVG NYQMTKTMRA IVGSMLLACM TLAPTAANAQ MLQCAPFARM 
FSGIQLFGAA ASWWNQSVGK YLRGDTPAVG AVLVFKAIGS MRSGHVATVT QVVSDRVIKI
THANWSIING RRGQVERDVT VVDASPNNDW SKVKVWFAPI GKVGNTAYPV NGFIYKDGSK
STAAAVQAVQ G