| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2735 |
|---|
| Symbol | |
|---|
| ID | 5197596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3021829 |
|---|
| End bp | 3023160 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640582288 |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_001263228 |
|---|
| Protein GI | 148555646 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.453447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0434107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACG AGCAAAGCGC CGACCTTCCC TATCTCCGCA AGATCGTCGG CGCGTCGATG
GCGGGCACCG TCGTCGAATG GTACGAGTTC TTCCTCTACG GCACCGCCGC GACGCTGGTG
TTCGGCAAGC TGTTCTTCCC GCCGACCGGC AACGAGCTGG ACGGCATCAT CGCCGCCTTC
GGCACCTATG CGGTGGGCTT CATCGCCCGG CCGCTGGGCG GGATCGTGTT CGGCCATGTC
GGCGACCGCA TCGGCCGCAA GTCGCTGCTC CAGTTCAGCC TCGTCCTGAT CGGCGCGTCG
ACCTTCCTGA TGGGGTGCCT GCCGACCTTC GCGACGATCG GCTATTGGGC GCCGCTGCTG
CTGGTGCTGC TGCGCTTCGT CCAGGGCTTC GCGCTGGGCG GCGAATGGGG CGGCGCGGTT
CTGCTCGTCA CCGAACACAG CCCCAATCGC AGCCGCGGCT TCTGGGGCAG CTTCCCGCAG
GCGGGCATCC CGATGGGCAA CCTGCTCGCG ACGATCGTCC TCCTGCTGCT GTCCGCGACG
CTCAGCGAGG GCGAATTCCT CGCCTGGGGC TGGCGGGTCG GCTTCTGGCT GTCGGTGATC
ATCGTCGGGG TCGGCTATTA TATCCGCACC AAGGTCAGCG ATTCGCCGAT CTTCGAGGCG
GCGAAGGCCG AGGCCGAGCA GCGCGCCGAC GCCGGCTATG GCGTGGCCGA GGTGTTCCGC
CACTATCCGC GCGGCGTGTT CACCGCGATG GGGCTGCGGG TGGCGGAGAA CATCCTCTAT
TATATGGTGG TCACCTTCTC GATCACCTAT CTCGCCCATA TCGGCGTCGA CACGACCGAG
ATCCTGGCGC TGCTGTTCTG CGCGCACCTG CTGCACATCG TGCTGATCCC GTCGATCGGC
CGGCTCGCCG ACCGGATCGG GCGCAAGCCG GTCTACATCG CCGGCGCGGG CCTCACCATC
GCCTGGCCGT TCGTCGCCTT CCCGCTGTTC GACACCGGCC AGGCGCCGAT CATCCTCGCC
GGGATCATGA TCGGCATGGC GGTCCACGCG CTGATGTACG CGCCGCAGCC CGCGATCCTG
ACCGAGATGT TCCCGACCCG GATGCGCTAT TCGGGGGTGT CGCTCGGCTA TCAGGTGACG
GCGATCTTCG CCGGGTCCTG GGCGCCGCTG ATCGGCGCCG CGCTGCTGCG CGCCTATGAC
AGCTGGCACC CGATCGCGCT CTACGTCGCG GGCGCGGGGG TGATCAGCCT CGTCTCCGCG
CTGGTCATGA CCGAGACGCG CGGCGTCTCG CTGCTCGCGA TCGACCGCGC CGACCGCGAG
CGAACGGCCT GA
|
|---|
| Protein sequence | MQHEQSADLP YLRKIVGASM AGTVVEWYEF FLYGTAATLV FGKLFFPPTG NELDGIIAAF
GTYAVGFIAR PLGGIVFGHV GDRIGRKSLL QFSLVLIGAS TFLMGCLPTF ATIGYWAPLL
LVLLRFVQGF ALGGEWGGAV LLVTEHSPNR SRGFWGSFPQ AGIPMGNLLA TIVLLLLSAT
LSEGEFLAWG WRVGFWLSVI IVGVGYYIRT KVSDSPIFEA AKAEAEQRAD AGYGVAEVFR
HYPRGVFTAM GLRVAENILY YMVVTFSITY LAHIGVDTTE ILALLFCAHL LHIVLIPSIG
RLADRIGRKP VYIAGAGLTI AWPFVAFPLF DTGQAPIILA GIMIGMAVHA LMYAPQPAIL
TEMFPTRMRY SGVSLGYQVT AIFAGSWAPL IGAALLRAYD SWHPIALYVA GAGVISLVSA
LVMTETRGVS LLAIDRADRE RTA
|
|---|
| |