| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2720 |
|---|
| Symbol | |
|---|
| ID | 5196877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3001566 |
|---|
| End bp | 3002330 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640582274 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_001263214 |
|---|
| Protein GI | 148555632 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.920886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC GGGTCCGCGT CATCCCCTGC CTCGACGTCG CCGGCGGGCG GGTCGTCAAG
GGCGTCAACT TCGTCGACCT CGCCGATGCC GGCGATCCGG TCGAGCAGGC GCGGGTCTAT
GATGCGGCGG GGGCGGACGA GCTCTGCTTC CTCGACATCA CCGCCAGCCA CGAAGGGCGC
GGCACCATCC TCGACGTCGT CGCGCGGACG GCGGCGGTCT GCTTCATGCC GCTGACCGTC
GGCGGCGGGG TGCGCAGCGC CGACGACGCT CGCGCGCTGC TGCTCGCCGG CGCGGACAAG
GTCGCGGTCA ACTCCGCGGC GGTGGCGCGG CCCGAACTGT GCGCCGAGAT GGCCGAGCGC
TTCGGCGCGC AATGCGTCGT CGGCGCGGTC GACGCGCGCG CCGTCGGCCC CGGCAAATGG
GAAATCTACA CCCATGGCGG CCGCAAGCCG ACCGGCATCG ACGCGGTCGA GCATGCCAAG
CGGCTCGCGT CGCTCGGCGC CGGGGAAATC CTGCTGACCT CGATGGACCG GGACGGCACC
CGCGACGGCT ACGACCTGGC GCTCACCCGC GCGATTTCCG ACGCGGTGCC GGTGCCGGTG
ATCGCCAGCG GCGGAGTCGG CAATCTCGGC CATCTCGTCG AAGGGGTGAC CAGGGGCGGC
GCCAGCGCGG TGCTCGCCGC GTCGATCTTC CACTTCGGCC AGCACAGCGT CGCCGAGGCG
CATGCCGCGC TCCGGGCCGC GGGGCTGCCG GTCCGAAACG GATAA
|
|---|
| Protein sequence | MTVRVRVIPC LDVAGGRVVK GVNFVDLADA GDPVEQARVY DAAGADELCF LDITASHEGR
GTILDVVART AAVCFMPLTV GGGVRSADDA RALLLAGADK VAVNSAAVAR PELCAEMAER
FGAQCVVGAV DARAVGPGKW EIYTHGGRKP TGIDAVEHAK RLASLGAGEI LLTSMDRDGT
RDGYDLALTR AISDAVPVPV IASGGVGNLG HLVEGVTRGG ASAVLAASIF HFGQHSVAEA
HAALRAAGLP VRNG
|
|---|
| |