Gene Swit_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2712 
Symbol 
ID5198872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2994597 
End bp2995289 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID640582266 
ProductATP12 ATPase 
Protein accessionYP_001263206 
Protein GI148555624 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5387] Chaperone required for the assembly of the mitochondrial F1-ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT TCTACAAGCA GGTGTCGGTC GAGCCCGTCG CGGGCGGCCA TGCGATCCGG 
CTCGACGGGC GCCCGGTGAA GACCCCGGCG CGCGCCGACC TCACCCTCCC CACCTCGGCG
CTGGCGCACG CCGTCGCCGC CGAATGGGAC GCGCAGGCCG AGGAGATCGA CCCGCGCCGC
ATGCCGCTGA CCGGGCTCGC CAACGCCGCG ATCGACCGGA TCGCGCCCGA TCCCGCCGCC
TTCGCCCGGG GCCTCGCCGC CTATGCCGAG ACCGACCTGC TCTGCTACCG CGCCGACAGC
CCGGCCAAAC TGGTCGACCG CCAGGCCGCG AGCTGGGACC CGCTGCTCGA CTGGGCGCGG
GACCGCTACG ACGTCCATTT CGAGACGGTC GCCGGAATCA TCCACCGCCC GCAGCCCGAC
GAGACGGTGC AGCGGCTGGC GGCGGCGGTC GCGGCGCACG ACGCCTTCCA CCTCGCCGCG
CTCCAGCCGC TCGTCACCAT CACCGGCTCG CTGGTGATCG CGCTGGCGCT GGCCGGGGGG
CGGATCGACG CCGAGCAGGC CTTCGCCGCC GCGCATCTCG ACGAGCTGTG GCAGGCCGAG
CAATGGGGCG AGGACGCGCT CGCCACCGAG GCCCGCGAGA ACCGCCGCGC CGATTTCAAG
GCGGCGGCGC GGTTGTTGGG GTTGTTGGTT TAG
 
Protein sequence
MKRFYKQVSV EPVAGGHAIR LDGRPVKTPA RADLTLPTSA LAHAVAAEWD AQAEEIDPRR 
MPLTGLANAA IDRIAPDPAA FARGLAAYAE TDLLCYRADS PAKLVDRQAA SWDPLLDWAR
DRYDVHFETV AGIIHRPQPD ETVQRLAAAV AAHDAFHLAA LQPLVTITGS LVIALALAGG
RIDAEQAFAA AHLDELWQAE QWGEDALATE ARENRRADFK AAARLLGLLV