| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2705 |
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| Symbol | |
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| ID | 5198739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2989683 |
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| End bp | 2990543 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582259 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001263199 |
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| Protein GI | 148555617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0707065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCCC CCCAGAAGAC TTCGCCGGGC AAGGCCCTGC CGCCGCCCAA GCGCGGCCGC
CGCCAGGCGC GCACCGCGCC CGCCGCCCCG GCCAACCCGC ATCCCGCCCG CGCCGCCGCC
AAGGGCGGAC GCGAGCCGCA GCGCATCGCC AAGCTGCTCG CCCGCGCCGG CATCGCCTCG
CGCCGCGAGA TCGAGCGGAT GATCGCCGAG GGCCGCGTCG CGATCGACGG CGCCGCGATC
GACACCCCCG CGACGCTGCT CACCTCGCTC AAGGGCGTGA CCGTCGACGG CAAGCCGGTG
GCCGCGCCGG AGGCGACCCG CCTGTTCCTG TTCCACAAGC CCAAGGGGCT GCTCACCACC
GAGCGCGACC CCAAGGGGCG GCCGACCATC TATGACCGGC TGCCCGCCGG GCTGCCGCGG
GTGATGCCGG TCGGCCGGCT CGACCTCAAC ACCGAGGGGC TGCTGCTGCT GACCACCGAC
GGCGAGTTCA AGCGCCAGCT CGAACTGCCC TCGACCGGGG TCGAGCGGAT CTATCGCGCG
CGCTGCTATG GCACCGTCCA TCAGGAGCAG CTCGAGGCGC TGATCGAGGG GATCGAGATC
GACGGCGTCC GCTACGGATC GATCGACGCG AACATGGAGC GCCGCACCGG CGCCAATGTC
TGGATCGAGA TGAAGCTGCG CGAGGGCAAG AATCGCGAGG TGCGCCGCGT GCTCGAGCAT
CTCGGCCTCG AAGTGTCGCG GCTGATCCGC ATCGCCTATG GCGCGTTCGA GCTCGGCGAT
CTCCAGCCGG GCGAGGTCGG CGAGATCGCC CAGCACCAGC TCGTCGCCTT CCGCAAGACG
CTCAAGGGCG GCCGCGAATG A
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| Protein sequence | MRPPQKTSPG KALPPPKRGR RQARTAPAAP ANPHPARAAA KGGREPQRIA KLLARAGIAS
RREIERMIAE GRVAIDGAAI DTPATLLTSL KGVTVDGKPV AAPEATRLFL FHKPKGLLTT
ERDPKGRPTI YDRLPAGLPR VMPVGRLDLN TEGLLLLTTD GEFKRQLELP STGVERIYRA
RCYGTVHQEQ LEALIEGIEI DGVRYGSIDA NMERRTGANV WIEMKLREGK NREVRRVLEH
LGLEVSRLIR IAYGAFELGD LQPGEVGEIA QHQLVAFRKT LKGGRE
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