Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2694 |
Symbol | gcvT |
ID | 5199044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2979362 |
End bp | 2980495 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582248 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_001263188 |
Protein GI | 148555606 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACG AAAACCTGAC CCCCGAAGAG CCGGGCGATA TCATCCAGAC CCTGCCGCTC GACCGGTGGC ACCGCGACCA GGGCGCGCGC ATGGTGCCCT TCGCCGGCTA CTCCATGCCG ATCCAATATG AGGGCATCCT CGCCGAGCAT CTGTGGACCC GCGAATCGGC GGGGCTGTTC GACGTGTCGC ACATGGGCCA GCTGCTGGTC AGCGGCGACG GCGTCGATAC GGCGCTGGAG GCGCTGATGC CGGGCGACTT CGTCCAGCTC GGCGTCGACC GGATGCGCTA TTCGCTGCTG CTCGACGACC AGGGCGGCAT CCTCGACGAC CTGATGGTGA CGCGCCGCGC GGGCGACTTC TACCTGGTCG TCAACGGCGC GACCAAGGCC GACGACATCG CCCATCTCCA TGAGCATCTG CCCGAGGAGC TGACCCTCAA CCATCTCGAC GAACATGCGC TGCTGGCGCT GCAGGGGCCC AAGGCGGTCG ACGCGCTCGC TCGCATTTGC CCCGGGGTCG AGATGCTGAC CTTCATGACC GCCGGCGCGT TCGAGCTGGC CGGCGCGCCG GTGTGGATCA GCCGCTCGGG CTATACCGGC GAGGACGGGT TCGAGATCTC GCTTCCCGCC GACGCGGCCG AGGCGGCGGC GACGCTGCTG CTCGCCCAGC CCGAGGTGAA GCCGATCGGC CTGGGCGCGC GCGATTCGCT GCGGCTCGAA GCCGGGCTGC CGCTCTACGG CCACGATCTC GACACCGATA CCGACCCGGC GACCGCCGGC CTCGGCTTCG CGGTGCCCAA GCGCCGCCGC GCCGAGGGCG GCTTCCCGGG CGCGACCCGG ATCGTCCGCG ACCTGCGCGA GGGCGCCCCG CGCAAGCGGA TCGGCCTGAT CCTCGCCGGC CGCCTGCCGG CGCGCGAGGG CGCGGCGATC TTCGACGGCG ACACGGCGGT CGGCGCGGTC AGCTCGGGCG GCTTCTCGCC CTCGCTGCAG GTGCCGATCG CGATGGGCTA TGTCCTGGCG GCCAGCGCCG AGCTCAACCG CCCGCTCCAG ATCGAGGTGC GGGGCAAGCG GCTCGATGCC GTCGTCGCCC CCATGCCTTT CGTCCCCCAC CGTTATGTCC GCCAAGGGAA CTGA
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Protein sequence | MSDENLTPEE PGDIIQTLPL DRWHRDQGAR MVPFAGYSMP IQYEGILAEH LWTRESAGLF DVSHMGQLLV SGDGVDTALE ALMPGDFVQL GVDRMRYSLL LDDQGGILDD LMVTRRAGDF YLVVNGATKA DDIAHLHEHL PEELTLNHLD EHALLALQGP KAVDALARIC PGVEMLTFMT AGAFELAGAP VWISRSGYTG EDGFEISLPA DAAEAAATLL LAQPEVKPIG LGARDSLRLE AGLPLYGHDL DTDTDPATAG LGFAVPKRRR AEGGFPGATR IVRDLREGAP RKRIGLILAG RLPAREGAAI FDGDTAVGAV SSGGFSPSLQ VPIAMGYVLA ASAELNRPLQ IEVRGKRLDA VVAPMPFVPH RYVRQGN
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