Gene Swit_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2687 
SymbolsecA 
ID5200614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2970023 
End bp2972761 
Gene Length2739 bp 
Protein Length912 aa 
Translation table11 
GC content66% 
IMG OID640582241 
Productpreprotein translocase subunit SecA 
Protein accessionYP_001263181 
Protein GI148555599 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.783539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCG GCCTCGCCAA AGCCATCTTC GGATCGTCGA ACGATCGTTA TGTGAAGTCG 
CTGCGCCCGA TCCTGCAGAA GATCGCAGGA TTCGAGCCGA CGCTCGAGGC GATGAACGAC
GAGGAGCTGG CCGCCCAGAC GGTCAAATTC CGCCAGCGGC TCGACGCCGG CGAGACGCTC
GATTCGCTGC TGCCCGAGGC GTTCGCCACG GTGCGCGAGG CGGCCCGCCG CGTGCTGGGC
CAGCGCCATT ACGACGTGCA GATGATCGGC GGCATCGTCC TCCATCGCGG CGAGATCGCC
GAGATGCGGA CCGGCGAGGG CAAGACGCTG GTCGCGACGC TGGCGGTCTA CCTCAACGCG
CTGCCGGGCG AGGGCGTCCA CGTCGTCACC GTCAACGACT ATCTCGCTAC CCGCGACGCG
GAGTGGATGG GCCGCGTCTA CCGCTTCCTC GGCCTGACCG TCGGCGTGAT CGTGCCCAAC
CTGTCCGACC AGGAACGGCG CGACGCCTAT GGCGCCGACA TCACCTACGG CACGAACAAC
GAGTTCGGCT TCGACTATCT GCGCGACAAC ATGAAATATG ACCGCGCGCT GATGGTCCAC
CGGCCGTTCA ACTTCGCGGT GGTCGACGAG GTCGATTCGG TGCTGATCGA CGAGGCGCGC
ACCCCGCTGA TCATCTCCGG CCCGACCGAC GACAAGTCCG AACTGTACAT GCAGGTCGAC
GCGATCGTGA AGCAGGTCAC CAAGGACGAT TACGAGTTCG ACGAGAAGCA GCGGTCGGTG
GTGCTGACCG AGGACGGCAC CGAGCGGATC GAGCGGCTGC TGGAGGCGGC GGGCCTGCTC
GAAGGCGGCA ATCTCTACGC CTATGAGAAC ACCCAGGTCG TCCATCACCT GAACCAGGCG
CTGCGCGCCA ACGTCGCCTT CAAGCGCGAC ACCGACTATA TCGTCAAGGA CGAGAAGATC
ATCATCATCG ACGAGTTCAC CGGTCGCATG ATGGACGGCC GGCGCTGGTC GGACGGCCTG
CACCAGGCGG TCGAGGCCAA GGAAGGCGTC AAGATCGAGC CCGAGAACCA GACGCTCGCC
TCGATCACCT TCCAGAATTA TTTCCGCATG TACCCCAAGC TGGGCGGCAT GACGGGCACG
GCCGCGACCG AGGCCCATGA ATTCTACCAG ATCTACAAGA TGAACGTCGT CACGATCCCG
ACCAACCTGC CGGTCAAGCG GATCGACCAG GACGACGAAT TCTACAAGAA CATGCTCGAT
AAATTCGCCG CGATCACCCA GGCGATCCGC GAGGCGAAGG AGCGCGGCCA GCCGGTGCTG
GTCGGCACCG TGTCGATCGA GAAGTCGGAA CTGCTGTCCG AGTTCCTGAC CAAGGAGAAG
GTCGAGCACA AGGTGCTCAA CGCCCGCTAC CACGAGCAGG AGGCGCACAT CGTGGCGCAG
GCCGGCCGGC TCGGCGCGGT GACGATCGCC ACCAACATGG CGGGCCGCGG CACCGACATC
CAGCTCGGCG GCAACCTCGA ATTCCGCATG CTCGACGAGC ATCCCGCGCT CGAGATCGGC
ACCCCCGAAT TCGACGCGGC GGCCGAGCGC ATCCGCGGCG AGATCATCGC CGAGAAGGAA
GCGGTGCTCG CCGCCGGCGG CCTGTTCGTG CTCGGCACCG AGCGGCACGA GAGCCGCCGC
ATCGACAACC AGCTGCGCGG CCGGTCGGGC CGCCAGGGCG ATCCGGGCCT CAGCCGCTTC
TACCTGTCGC TCGACGACGA CCTGCTGCGC ATCTTCGGCC CGCAGACGAT GTTCGCGCGG
ATGATGAACA AGAACCTCGC CGACGGCGAG GCGATCGTCA GCCCGTGGAT CTCCAAGGCG
ATCGAGACCG CGCAGAAGAA GGTCGAGGCG CGCAACTACG ACATCCGCAA GCAGGTCGTC
GAATATGACG ACGTGATGAA CGACCAGCGC AAGGTGATCT ACGAGCAGCG CGCCGACATC
ATGGATGCCG AGACGGTCGA CGACGTCGTC ACCGACATGC GCGCCGACAC CGCCAATGCG
ATCGTCGGCG GCTGCTGCCC GCCGCACAGC TATCCCGAGC AGTGGGACGT CGATACGCTC
AAGCTGCGCT CGGCCGAGAC GCTGGGCATC ACGCCGCCGT TCGACGAGTG GATCGAGCAG
GACGGCATCG ATCCCGAGAT CCTGGCCGAG AAGGTGCTGG CCGAGGCCGA CGCGGTGATC
GCCGCCAAGC GCGCGACGAT CGACGACCAG AGCTGGCACG GCATCGAGAA GAGCGTGCTG
CTCCAGACGC TCGACCATCA CTGGAAGGAG CATCTGGCGA CGCTCGACGC GCTGCGCCAG
GTGATCCACC TGCGCGCCTA TGCGCAGAAG ACGCCGATCA ACGAATATAA GCACGAGGCC
TTCGCGCTGT TCGAGCGGAT GCTCGTCGCG ATCCGCGAGG AGGTGACCCG CGTCCTCGCC
CATGTCCGCT TCGAGATGGC GCCGCAGGAC TATGCCGAGC TGCCGCCGAT GCCCGACTTC
GTCACCGAGC ATGTCAACGC GCTGACCGGC GAGGACAATT CGGGCGACCG CGACGGCGGC
ACGCTGGGGA TCATCGGCAG CCGGGTGCCG CAGGCGATCG CCGCCCCGGC CGGCGACGAT
TTCGAGATCA CCCCGGAGAT CGCGGCGACG CTCGGCCGCA ACTCGCTCTG CCCCTGCGGC
TCGGGCCGCA AGTACAAGCA TTGCCACGGC GCGCTCTAA
 
Protein sequence
MLGGLAKAIF GSSNDRYVKS LRPILQKIAG FEPTLEAMND EELAAQTVKF RQRLDAGETL 
DSLLPEAFAT VREAARRVLG QRHYDVQMIG GIVLHRGEIA EMRTGEGKTL VATLAVYLNA
LPGEGVHVVT VNDYLATRDA EWMGRVYRFL GLTVGVIVPN LSDQERRDAY GADITYGTNN
EFGFDYLRDN MKYDRALMVH RPFNFAVVDE VDSVLIDEAR TPLIISGPTD DKSELYMQVD
AIVKQVTKDD YEFDEKQRSV VLTEDGTERI ERLLEAAGLL EGGNLYAYEN TQVVHHLNQA
LRANVAFKRD TDYIVKDEKI IIIDEFTGRM MDGRRWSDGL HQAVEAKEGV KIEPENQTLA
SITFQNYFRM YPKLGGMTGT AATEAHEFYQ IYKMNVVTIP TNLPVKRIDQ DDEFYKNMLD
KFAAITQAIR EAKERGQPVL VGTVSIEKSE LLSEFLTKEK VEHKVLNARY HEQEAHIVAQ
AGRLGAVTIA TNMAGRGTDI QLGGNLEFRM LDEHPALEIG TPEFDAAAER IRGEIIAEKE
AVLAAGGLFV LGTERHESRR IDNQLRGRSG RQGDPGLSRF YLSLDDDLLR IFGPQTMFAR
MMNKNLADGE AIVSPWISKA IETAQKKVEA RNYDIRKQVV EYDDVMNDQR KVIYEQRADI
MDAETVDDVV TDMRADTANA IVGGCCPPHS YPEQWDVDTL KLRSAETLGI TPPFDEWIEQ
DGIDPEILAE KVLAEADAVI AAKRATIDDQ SWHGIEKSVL LQTLDHHWKE HLATLDALRQ
VIHLRAYAQK TPINEYKHEA FALFERMLVA IREEVTRVLA HVRFEMAPQD YAELPPMPDF
VTEHVNALTG EDNSGDRDGG TLGIIGSRVP QAIAAPAGDD FEITPEIAAT LGRNSLCPCG
SGRKYKHCHG AL