Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2687 |
Symbol | secA |
ID | 5200614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2970023 |
End bp | 2972761 |
Gene Length | 2739 bp |
Protein Length | 912 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640582241 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001263181 |
Protein GI | 148555599 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.783539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCG GCCTCGCCAA AGCCATCTTC GGATCGTCGA ACGATCGTTA TGTGAAGTCG CTGCGCCCGA TCCTGCAGAA GATCGCAGGA TTCGAGCCGA CGCTCGAGGC GATGAACGAC GAGGAGCTGG CCGCCCAGAC GGTCAAATTC CGCCAGCGGC TCGACGCCGG CGAGACGCTC GATTCGCTGC TGCCCGAGGC GTTCGCCACG GTGCGCGAGG CGGCCCGCCG CGTGCTGGGC CAGCGCCATT ACGACGTGCA GATGATCGGC GGCATCGTCC TCCATCGCGG CGAGATCGCC GAGATGCGGA CCGGCGAGGG CAAGACGCTG GTCGCGACGC TGGCGGTCTA CCTCAACGCG CTGCCGGGCG AGGGCGTCCA CGTCGTCACC GTCAACGACT ATCTCGCTAC CCGCGACGCG GAGTGGATGG GCCGCGTCTA CCGCTTCCTC GGCCTGACCG TCGGCGTGAT CGTGCCCAAC CTGTCCGACC AGGAACGGCG CGACGCCTAT GGCGCCGACA TCACCTACGG CACGAACAAC GAGTTCGGCT TCGACTATCT GCGCGACAAC ATGAAATATG ACCGCGCGCT GATGGTCCAC CGGCCGTTCA ACTTCGCGGT GGTCGACGAG GTCGATTCGG TGCTGATCGA CGAGGCGCGC ACCCCGCTGA TCATCTCCGG CCCGACCGAC GACAAGTCCG AACTGTACAT GCAGGTCGAC GCGATCGTGA AGCAGGTCAC CAAGGACGAT TACGAGTTCG ACGAGAAGCA GCGGTCGGTG GTGCTGACCG AGGACGGCAC CGAGCGGATC GAGCGGCTGC TGGAGGCGGC GGGCCTGCTC GAAGGCGGCA ATCTCTACGC CTATGAGAAC ACCCAGGTCG TCCATCACCT GAACCAGGCG CTGCGCGCCA ACGTCGCCTT CAAGCGCGAC ACCGACTATA TCGTCAAGGA CGAGAAGATC ATCATCATCG ACGAGTTCAC CGGTCGCATG ATGGACGGCC GGCGCTGGTC GGACGGCCTG CACCAGGCGG TCGAGGCCAA GGAAGGCGTC AAGATCGAGC CCGAGAACCA GACGCTCGCC TCGATCACCT TCCAGAATTA TTTCCGCATG TACCCCAAGC TGGGCGGCAT GACGGGCACG GCCGCGACCG AGGCCCATGA ATTCTACCAG ATCTACAAGA TGAACGTCGT CACGATCCCG ACCAACCTGC CGGTCAAGCG GATCGACCAG GACGACGAAT TCTACAAGAA CATGCTCGAT AAATTCGCCG CGATCACCCA GGCGATCCGC GAGGCGAAGG AGCGCGGCCA GCCGGTGCTG GTCGGCACCG TGTCGATCGA GAAGTCGGAA CTGCTGTCCG AGTTCCTGAC CAAGGAGAAG GTCGAGCACA AGGTGCTCAA CGCCCGCTAC CACGAGCAGG AGGCGCACAT CGTGGCGCAG GCCGGCCGGC TCGGCGCGGT GACGATCGCC ACCAACATGG CGGGCCGCGG CACCGACATC CAGCTCGGCG GCAACCTCGA ATTCCGCATG CTCGACGAGC ATCCCGCGCT CGAGATCGGC ACCCCCGAAT TCGACGCGGC GGCCGAGCGC ATCCGCGGCG AGATCATCGC CGAGAAGGAA GCGGTGCTCG CCGCCGGCGG CCTGTTCGTG CTCGGCACCG AGCGGCACGA GAGCCGCCGC ATCGACAACC AGCTGCGCGG CCGGTCGGGC CGCCAGGGCG ATCCGGGCCT CAGCCGCTTC TACCTGTCGC TCGACGACGA CCTGCTGCGC ATCTTCGGCC CGCAGACGAT GTTCGCGCGG ATGATGAACA AGAACCTCGC CGACGGCGAG GCGATCGTCA GCCCGTGGAT CTCCAAGGCG ATCGAGACCG CGCAGAAGAA GGTCGAGGCG CGCAACTACG ACATCCGCAA GCAGGTCGTC GAATATGACG ACGTGATGAA CGACCAGCGC AAGGTGATCT ACGAGCAGCG CGCCGACATC ATGGATGCCG AGACGGTCGA CGACGTCGTC ACCGACATGC GCGCCGACAC CGCCAATGCG ATCGTCGGCG GCTGCTGCCC GCCGCACAGC TATCCCGAGC AGTGGGACGT CGATACGCTC AAGCTGCGCT CGGCCGAGAC GCTGGGCATC ACGCCGCCGT TCGACGAGTG GATCGAGCAG GACGGCATCG ATCCCGAGAT CCTGGCCGAG AAGGTGCTGG CCGAGGCCGA CGCGGTGATC GCCGCCAAGC GCGCGACGAT CGACGACCAG AGCTGGCACG GCATCGAGAA GAGCGTGCTG CTCCAGACGC TCGACCATCA CTGGAAGGAG CATCTGGCGA CGCTCGACGC GCTGCGCCAG GTGATCCACC TGCGCGCCTA TGCGCAGAAG ACGCCGATCA ACGAATATAA GCACGAGGCC TTCGCGCTGT TCGAGCGGAT GCTCGTCGCG ATCCGCGAGG AGGTGACCCG CGTCCTCGCC CATGTCCGCT TCGAGATGGC GCCGCAGGAC TATGCCGAGC TGCCGCCGAT GCCCGACTTC GTCACCGAGC ATGTCAACGC GCTGACCGGC GAGGACAATT CGGGCGACCG CGACGGCGGC ACGCTGGGGA TCATCGGCAG CCGGGTGCCG CAGGCGATCG CCGCCCCGGC CGGCGACGAT TTCGAGATCA CCCCGGAGAT CGCGGCGACG CTCGGCCGCA ACTCGCTCTG CCCCTGCGGC TCGGGCCGCA AGTACAAGCA TTGCCACGGC GCGCTCTAA
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Protein sequence | MLGGLAKAIF GSSNDRYVKS LRPILQKIAG FEPTLEAMND EELAAQTVKF RQRLDAGETL DSLLPEAFAT VREAARRVLG QRHYDVQMIG GIVLHRGEIA EMRTGEGKTL VATLAVYLNA LPGEGVHVVT VNDYLATRDA EWMGRVYRFL GLTVGVIVPN LSDQERRDAY GADITYGTNN EFGFDYLRDN MKYDRALMVH RPFNFAVVDE VDSVLIDEAR TPLIISGPTD DKSELYMQVD AIVKQVTKDD YEFDEKQRSV VLTEDGTERI ERLLEAAGLL EGGNLYAYEN TQVVHHLNQA LRANVAFKRD TDYIVKDEKI IIIDEFTGRM MDGRRWSDGL HQAVEAKEGV KIEPENQTLA SITFQNYFRM YPKLGGMTGT AATEAHEFYQ IYKMNVVTIP TNLPVKRIDQ DDEFYKNMLD KFAAITQAIR EAKERGQPVL VGTVSIEKSE LLSEFLTKEK VEHKVLNARY HEQEAHIVAQ AGRLGAVTIA TNMAGRGTDI QLGGNLEFRM LDEHPALEIG TPEFDAAAER IRGEIIAEKE AVLAAGGLFV LGTERHESRR IDNQLRGRSG RQGDPGLSRF YLSLDDDLLR IFGPQTMFAR MMNKNLADGE AIVSPWISKA IETAQKKVEA RNYDIRKQVV EYDDVMNDQR KVIYEQRADI MDAETVDDVV TDMRADTANA IVGGCCPPHS YPEQWDVDTL KLRSAETLGI TPPFDEWIEQ DGIDPEILAE KVLAEADAVI AAKRATIDDQ SWHGIEKSVL LQTLDHHWKE HLATLDALRQ VIHLRAYAQK TPINEYKHEA FALFERMLVA IREEVTRVLA HVRFEMAPQD YAELPPMPDF VTEHVNALTG EDNSGDRDGG TLGIIGSRVP QAIAAPAGDD FEITPEIAAT LGRNSLCPCG SGRKYKHCHG AL
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