Gene Swit_2661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2661 
Symbol 
ID5198425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2940771 
End bp2941145 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content65% 
IMG OID640582215 
ProductPilT domain-containing protein 
Protein accessionYP_001263155 
Protein GI148555573 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTATC TCATCGACAC CAATTGCTGC ATCTTCCTGT TCGCCGGCGT CCATCCGGTG 
CTGGCGGACA GGGTCGGCGC GTTGGGCGAG GGCACGGTCG GCCTTTCGAC GATCGTTCTC
GCCGAACTGG CGCTCGGCAG TGCCAACGGC AAGGAACCCT CTCCCGCGGC GCTCGACCGA
CTCGTCGGAA TATTCCCGGT GCTGCCTTTC GATGAAGCGG CCGCTCGCGC CTATGCGCGC
CTTCCGTTCA AGCGCGGCCG CTTCGATCGC CTGCTGGCGG CCCACGCGCT TTCGCTCGAT
CTGACCGTCA TCACCAACAA CGAACGCGAC TTCAGCGATA TCGCGGGCCT GAGGGTCGAG
AACTGGACGA TCTGA
 
Protein sequence
MRYLIDTNCC IFLFAGVHPV LADRVGALGE GTVGLSTIVL AELALGSANG KEPSPAALDR 
LVGIFPVLPF DEAAARAYAR LPFKRGRFDR LLAAHALSLD LTVITNNERD FSDIAGLRVE
NWTI