Gene Swit_2657 details

Gene Information

• Locus tag: Swit_2657
• Symbol: rpsP
• ID: 5198481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: +
• Start bp: 2939119
• End bp: 2939583
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640582211
• Product: 30S ribosomal protein S16
• Protein accession: YP_001263151
• Protein GI: 148555569
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0228] Ribosomal protein S16
• TIGRFAM ID: [TIGR00002] ribosomal protein S16

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCGTTT CCATTCGTCT CGCCCGTGGC GGCGCCAAGA AGCGCCCCTA TTACCGCATC 
GTCGTCGCCG ACGCGCGCAG CCCGCGCGAC GGCGCCTTCA TCGAGAAGAT CGGCGCCTAC 
AACCCGCTGC TCGCCAAGGA CGATCCCAAG CGCGTCGTCC TCGACACCGA TCGCGCCAAG 
CATTGGCTGT CGGTCGGCGC GCAGCCGACC GACCGCGTCG CCCGCTTCCT CGACGCCGCC 
GGCGTCCAGG AGCGCGCCGC CCGCAGCAAC CCGAAGAAGG CCGAGCCGGG CGAGAAGGCC 
AAGGAGCGCG CCGAGGAGCG CGCGGCCAAG CTCGCCGCCG CCGAGGAAGC CGCCAACGCC 
CCGGCCGAAG AGCCGGCCGC CGAGCCGGCC GCTGAGGAAG TGACCGAGGT CGCCGCCGAG 
GCCCCGGCCG AGGAAGCCGC CGCCGAGGAA TCGACCGAGG CTTGA 

 

Protein sequence

MAVSIRLARG GAKKRPYYRI VVADARSPRD GAFIEKIGAY NPLLAKDDPK RVVLDTDRAK 
HWLSVGAQPT DRVARFLDAA GVQERAARSN PKKAEPGEKA KERAEERAAK LAAAEEAANA 
PAEEPAAEPA AEEVTEVAAE APAEEAAAEE STEA