Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2654 |
Symbol | |
ID | 5201018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2934053 |
End bp | 2934799 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640582208 |
Product | hypothetical protein |
Protein accession | YP_001263148 |
Protein GI | 148555566 |
COG category | [R] General function prediction only |
COG ID | [COG3233] Predicted deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.590391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGCGC GGTATCTGTT CCGGCTGGAT GATATTTGTC CAACGATGGA TTGGGCACGG TTTAACGCCG TTGCCGATAT CTTTATGCGC TTCGAAGTCC AGCCGCTTTT GGGCGTGATA CCTGATAACA AAGATGCTTC TCTGAAGCGT GACCCTGCTG ACCCGCGCTT CTGGGATAAG ATGCGTCATT TTCATAGCGC TCGGGGTTGG ACGATTTCCC AGCATGGCTA TCAGCATCAG TATGTAACAC GGGATGCGGG TATACTAGGT ATCAATAAAA ATAGCGAATT TGCAGGTCTT CCGCGAGATA TTCAGTTTGA AAAAATCGCT AAGGGGAAAA CTATCCTGAC TAAAGAGGAT TTAGCGACCG ATATATTTAT GCCGCCATCT CACTCATTCG ATCAGAATAC CATCGATGCT CTCATGGATA GCGAATTCCG GTTTGTCACG GATGGATATT CTATTCTCCC TTATGAGAGG AAAGGTATAA AATTCATTCC CTGTCAAATC TCTCGCCTAG TTCCGATTCC AATAGGTTTA GTGACTTTTT GTTTACATAC GAACACAATT GAAGCCGATT TTCCTGAGAA GCTTAACCAT TTTCTCACAA ATAATAGAAA TCGTACCATT AATTTCACTG AGGCAGCCGA AGTGCGCGCT TCAGCTAGTC AGGTTCTGAT CGAAGGGGCG GTGCTTTCGG TGCGCCGTGC CGCCCATTCT GTCAGAGCGC GTCGTAGAGC TGTCTAG
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Protein sequence | MKARYLFRLD DICPTMDWAR FNAVADIFMR FEVQPLLGVI PDNKDASLKR DPADPRFWDK MRHFHSARGW TISQHGYQHQ YVTRDAGILG INKNSEFAGL PRDIQFEKIA KGKTILTKED LATDIFMPPS HSFDQNTIDA LMDSEFRFVT DGYSILPYER KGIKFIPCQI SRLVPIPIGL VTFCLHTNTI EADFPEKLNH FLTNNRNRTI NFTEAAEVRA SASQVLIEGA VLSVRRAAHS VRARRRAV
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