Gene Swit_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2654 
Symbol 
ID5201018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2934053 
End bp2934799 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content46% 
IMG OID640582208 
Producthypothetical protein 
Protein accessionYP_001263148 
Protein GI148555566 
COG category[R] General function prediction only 
COG ID[COG3233] Predicted deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.590391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGCGC GGTATCTGTT CCGGCTGGAT GATATTTGTC CAACGATGGA TTGGGCACGG 
TTTAACGCCG TTGCCGATAT CTTTATGCGC TTCGAAGTCC AGCCGCTTTT GGGCGTGATA
CCTGATAACA AAGATGCTTC TCTGAAGCGT GACCCTGCTG ACCCGCGCTT CTGGGATAAG
ATGCGTCATT TTCATAGCGC TCGGGGTTGG ACGATTTCCC AGCATGGCTA TCAGCATCAG
TATGTAACAC GGGATGCGGG TATACTAGGT ATCAATAAAA ATAGCGAATT TGCAGGTCTT
CCGCGAGATA TTCAGTTTGA AAAAATCGCT AAGGGGAAAA CTATCCTGAC TAAAGAGGAT
TTAGCGACCG ATATATTTAT GCCGCCATCT CACTCATTCG ATCAGAATAC CATCGATGCT
CTCATGGATA GCGAATTCCG GTTTGTCACG GATGGATATT CTATTCTCCC TTATGAGAGG
AAAGGTATAA AATTCATTCC CTGTCAAATC TCTCGCCTAG TTCCGATTCC AATAGGTTTA
GTGACTTTTT GTTTACATAC GAACACAATT GAAGCCGATT TTCCTGAGAA GCTTAACCAT
TTTCTCACAA ATAATAGAAA TCGTACCATT AATTTCACTG AGGCAGCCGA AGTGCGCGCT
TCAGCTAGTC AGGTTCTGAT CGAAGGGGCG GTGCTTTCGG TGCGCCGTGC CGCCCATTCT
GTCAGAGCGC GTCGTAGAGC TGTCTAG
 
Protein sequence
MKARYLFRLD DICPTMDWAR FNAVADIFMR FEVQPLLGVI PDNKDASLKR DPADPRFWDK 
MRHFHSARGW TISQHGYQHQ YVTRDAGILG INKNSEFAGL PRDIQFEKIA KGKTILTKED
LATDIFMPPS HSFDQNTIDA LMDSEFRFVT DGYSILPYER KGIKFIPCQI SRLVPIPIGL
VTFCLHTNTI EADFPEKLNH FLTNNRNRTI NFTEAAEVRA SASQVLIEGA VLSVRRAAHS
VRARRRAV