| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2636 |
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| Symbol | benD |
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| ID | 5199972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2919160 |
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| End bp | 2919942 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582192 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001263132 |
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| Protein GI | 148555550 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAG GGCGTTTCGC GGGCAAGGCG ATGGTCGTCA CCGGCGCCGG GCAGGGCATC
GGCGCTGGCG TCGCCGCTCG CGCCGCGGCG GAAGGGGCGA GCGTGCTCCT GGTCGACCGG
GCGGAGATCG TCGCGACGGT GGCGGATCGC ATCATCGCCG CCGGCGGCGT CGCGGCAACG
GCGCTGTGCG ACCTGGAGAC CGCGGCGGGC GCGCAGGCGG CGATGGCGGC GGCGATCGCC
GCCTTTGGGC GCATCGACAT CCTCGTCAAC AATGTCGGCG GCGCGATCCG AATGCGGCCC
TTCGCGGAGT TCGAGCCCGA CCAGATCGAC GCCGAGATCC GGCGCTCGCT GATGCCGACG
CTCTATTGCT GCCATGCGGT GCTGCCGGTG ATGCTGGCGC AGCGATCGGG CACCATCGTC
AACCTCTCGT CCAACGCGAC GCGCGGCATC CGCCGGGCGC CCTATTCGGC GGCCAAGGGC
GGGATCAACG GCCTGACCCA GAGCCTGGCC ATGGAATATG CCGGTTCCGG CATCCGCGTC
GTCGCGACCG CCCCCGGCGG GACCGAGGCC CCGCCCCGGC AGGTGCCGCG CAATGCGGCG
GGCGACAGCG AGCAGGAGCG CGCCTGGATG GCCGAGGCGG TCGCCCAGGT GACCGAATCG
AGCTTCCTCA AGCGCTACGG CACGCTCGAC GAGCAGATCG CCCCGATCCT GTTCCTCGCC
TCCGACGAGG CGAGCTACAT CACCGGCAGC ATCCTGCCGG TGGCCGGCGG CGACCTGGGG
TAG
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| Protein sequence | MFEGRFAGKA MVVTGAGQGI GAGVAARAAA EGASVLLVDR AEIVATVADR IIAAGGVAAT
ALCDLETAAG AQAAMAAAIA AFGRIDILVN NVGGAIRMRP FAEFEPDQID AEIRRSLMPT
LYCCHAVLPV MLAQRSGTIV NLSSNATRGI RRAPYSAAKG GINGLTQSLA MEYAGSGIRV
VATAPGGTEA PPRQVPRNAA GDSEQERAWM AEAVAQVTES SFLKRYGTLD EQIAPILFLA
SDEASYITGS ILPVAGGDLG
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