| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2629 |
|---|
| Symbol | |
|---|
| ID | 5196310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2913679 |
|---|
| End bp | 2914932 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640582185 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_001263125 |
|---|
| Protein GI | 148555543 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTCA AGCTGACGCC GCTGATCTTC GGCGGCATGG CGCTCGGCAT CGCGACCGGC
GTCGGCGTGC ATCTCTGGGC CGGCGGCGAC GCGGCCGCCG CCGCGCGGAT CGCCGACTAT
CTCCAGCTTC CGGCCGACGT CTTCCTGCGC CTGATCAAGA TGATCGTCGC GCCGCTGGTC
TTCGCGACGC TGGTGACGGG CATCGCGCAT ATGGGCGACG TCGCCAGCCT CGGCCGGATG
GGCGCCCGCG CGATGGGCTG GTTCGTCACC GCCGGGCTCG TCTCGCTCTC GCTCGGCCTG
CTGTTCGTCA ACGCCTTCGC GCCGGGCGAG GCACTGCACC TCGTCCGCAC CGCCGATCCC
GGCGGCATGG CCGAGAAGGC GCTGAGCTTC CGGCAGTTCG TGCTCCACAT CTTCCCCGAA
TCGGTCGTCC AGGCGATGGC CGAGAACCAG ATCCTGCAGA TCGTCGTCTT CTCGCTGTTC
GTCGGCGTCG CGCTGTCGGC GGCGGGCGAG CGGGGCAAGC CGCTGCTGGC CGTGGTCGAG
GCGACCGCCG AGCTGATGCT GACGATCACC GGCTATGTCA TGCGCGCCGC GCCGCTGGCG
GTGTTCGGCG CGATCGCGGC GACGGTCGCG ACCCAGGGCG CGGGGATATT GCTGACCTTC
GGCGCGCTGA TCGGGGAGTT CTACGTCGCG CTCGCCGCCT TGTGCCTGGT CCTGCTCGGC
GCCGGCGCGG CGTTCCTCGG CGGGGGCCTC GCGCCGCTGC TCCGCCATGT CCGCGAGCCG
CTGCTGCTCG CCTTCTCGAC CGCCTCCTCC GAAGCGGCCT ATCCGCGGCT GATGGAGGCG
CTCGACCGCG CCGGCGTCCC CCGCCGCGTC TACGGCTTCG TGCTGCCGCT CGGCTACAGC
TTCAACCTCG ACGGGTCGAT GATGTACGCC ACCTTCGCGG CGATCTTCAT CGCCCAGGCC
TATGGCGTCG ACCTGCCGAT CGCCACCCAG ATCACCATGC TGCTGGTGCT GATGGTCACC
AGCAAGGGGA TTGCGGGCGT ATCGCGCGCC AGCCTCGTCG TCGTCGCGGC GACGCTCGCC
CAGTTCGACC TTCCCGTCGA AGGGGTGGCG TTGCTGCTGG CGATCGATCA TTTCATGGAC
ATGGGCCGCA CCACGACCAA TGTGCTCGGC AACGCGATCG CCACCGCGGT CGTCGCCAAA
TGGGAAAGCG CGGACCAGCC TCGCCCCCTG ATCACCGAAA GCGGGAGACT GTGA
|
|---|
| Protein sequence | MRLKLTPLIF GGMALGIATG VGVHLWAGGD AAAAARIADY LQLPADVFLR LIKMIVAPLV
FATLVTGIAH MGDVASLGRM GARAMGWFVT AGLVSLSLGL LFVNAFAPGE ALHLVRTADP
GGMAEKALSF RQFVLHIFPE SVVQAMAENQ ILQIVVFSLF VGVALSAAGE RGKPLLAVVE
ATAELMLTIT GYVMRAAPLA VFGAIAATVA TQGAGILLTF GALIGEFYVA LAALCLVLLG
AGAAFLGGGL APLLRHVREP LLLAFSTASS EAAYPRLMEA LDRAGVPRRV YGFVLPLGYS
FNLDGSMMYA TFAAIFIAQA YGVDLPIATQ ITMLLVLMVT SKGIAGVSRA SLVVVAATLA
QFDLPVEGVA LLLAIDHFMD MGRTTTNVLG NAIATAVVAK WESADQPRPL ITESGRL
|
|---|
| |