| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2623 |
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| Symbol | |
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| ID | 5199615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2906772 |
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| End bp | 2907860 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582179 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001263119 |
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| Protein GI | 148555537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.724706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATATG TCCGCACCGC GCCGGAGCCG GTCCGCCCCG CGCCGCCCCG GCCGAAGCGG
CCGGCGCTGC GCTCGATCGT CACCGGCGGC GCCAATCTGC TGACCACGGC GATCATCGTC
CTGTTCGCGA TCCGCACGGT GCCGCACCTG CTGTCCTGGG CGGTGACCCA TGGCGTGTGG
AGCGGCGACG GCGCCGCCTG TCGCGAGGCG GGGGCCTGCT GGGCGTTCCT GCGCGCGAAG
ATGCCGTTCA TCCTGTTCGG CATCTATCCG GAGGCCGAGC GGTGGCGGCC GATCCTGGTC
GTCCTGATCC TCGGCGCCGC GACCTTATGG TCGCTGCCGC GCGCGCACTG GACCCGCGCG
ACGCTCGCCT TCTGGGGTTT CGCGATCGTC GCGTCGCTGC TGCTGATGGC GGGCGGGCGC
CTCGGCCTGT CGCCGGTGCC GACGTCGGCC TGGGGCGGCC TGCCGATCAC CATGCTGCTC
ACCATCTTCT CGCTGGCGCT GGGCTTCCCG TTCGGCATCG TGCTGGCGTT GGCGCGGCGG
TCGGACATGC CGGTCTATCG CTGGACGGCG ACCGCCCTGA TCGAGGTGAT GCGGGCGATG
CCGCTGGTGA CGCTGCTGTT CGTCGCCTCG GTGATGGCGC CGCTGCTGCT CCCGGCCGGC
GTCACCGCCG ACAACCTGAC CCGCGCGCTG GTGGCGTTCG TGCTCAGCTC CTCGGCCTAT
ATCGCGGAGG TGGTGCGCGG CGGCTTGCAG GGCGTCCCGC CGGGGCAGCG GGAATCGGCG
CGCGCGCTCG GCCTCGGCCG GTCGACCGTG CTGCTGTCGA TCATCCTGCC CCAGGCGATC
CGCAAGGCGC TCGCCCCGCT GACCAGCACC GTCGTCGTGA TCATCAAGAA CAGCAGCCTG
GTCCTCGTCG TCGGGCTGTT CGACCTGCTG AGCGCGGGCC GGGTGTCGCT CAACGATCCG
GCCTGGCCGA CGCCCTATGC CGAAACCTAT CTCGTGATCG CGCTGATCTA TTTCGTCATC
TGCTACGGCT TCGCGCGCTA TGCGTTGCAC CTCGAACGGA CGACGCAGGG CGGGGAGGGG
CGGCCGTGA
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| Protein sequence | MRYVRTAPEP VRPAPPRPKR PALRSIVTGG ANLLTTAIIV LFAIRTVPHL LSWAVTHGVW
SGDGAACREA GACWAFLRAK MPFILFGIYP EAERWRPILV VLILGAATLW SLPRAHWTRA
TLAFWGFAIV ASLLLMAGGR LGLSPVPTSA WGGLPITMLL TIFSLALGFP FGIVLALARR
SDMPVYRWTA TALIEVMRAM PLVTLLFVAS VMAPLLLPAG VTADNLTRAL VAFVLSSSAY
IAEVVRGGLQ GVPPGQRESA RALGLGRSTV LLSIILPQAI RKALAPLTST VVVIIKNSSL
VLVVGLFDLL SAGRVSLNDP AWPTPYAETY LVIALIYFVI CYGFARYALH LERTTQGGEG
RP
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