| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2613 |
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| Symbol | |
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| ID | 5199896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2896720 |
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| End bp | 2897298 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582169 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001263109 |
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| Protein GI | 148555527 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.6855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACCCGG GCGAGGGGGA GGAGCCGGAC GACGGCGCGC TCGCCGCCCG CGCGCTGGCG
GGGCATGAGG ACGCCTATCG GCTGCTGATG GCGCGGCACC GGGTTCCTGT CCACCGCTTC
GTCCGCGCCC AGGTCGCCGA TGCCGACGCG GCGCTCGACA TCGTCCAGGA AAGCTTCATC
GCCGCCTTCG CCCATCTCGG CCGCTACGAT CGCGACCGGC CGTTCCGCCA CTGGCTGATG
CGGATCGCGC TCAACAAGTG CCGCGACCAT CGCCGCCGTC AGATCGTGCG AGGCTTCTTC
GCGCGCGCCC GGCCGCTCGA CGAGGGGCTG CACGTCGCCG GGGCCGAGCC GGGCGCCGAT
GCCGAGATCG GCGGGCGGCA GGAATTGCGG CGGGCGCGGC AGGCGATCGA CGCCCTGCCG
GAGAAGCTCC GCTCGGTGCT GTTGCTGCGC ACCGTCGAGG GGATGAGCCA GGCCGAGGTG
GCGGCCCTGC TCGGCGTCAG CGGGAAGAGC GTCGAGACGC GGCTCTACCG CGCCCGCCTC
AAATTGTCCG AGATGCTGGG GCCTACGCCG ACTCCATAA
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| Protein sequence | MNPGEGEEPD DGALAARALA GHEDAYRLLM ARHRVPVHRF VRAQVADADA ALDIVQESFI
AAFAHLGRYD RDRPFRHWLM RIALNKCRDH RRRQIVRGFF ARARPLDEGL HVAGAEPGAD
AEIGGRQELR RARQAIDALP EKLRSVLLLR TVEGMSQAEV AALLGVSGKS VETRLYRARL
KLSEMLGPTP TP
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