| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2609 |
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| Symbol | |
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| ID | 5199373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2892910 |
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| End bp | 2894187 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 640582165 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001263105 |
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| Protein GI | 148555523 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.153251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAT TGCTCGCGGC CGTGCTGGCC GCGGCGTCGT GCGCCGCGAT GGCGCAGGCG
CAAACCGGGC AGCCGGCGTC GTCGACGCAG GCGGCGCCCG TCTACACGCT CGACCGGGCG
GTGCTCGACG CCGGCGGTTC CGCCCCGGCG GCGGAGGCCG CGCAGGCCGG GATCGACGCC
GCCCGGGCGG GGCGCACCGT CGCGGGGCTG CGGCCCAACC CGGTCGCGGA AGGGCAGGTC
GAGAACATCG CCGGCAGCGG GCCCTATAAG GGGCTGCGGA GCGCCGAGAC GACGATCGGC
GTCGCCCTGC CGATCGAGCT CGGCGGCAAG CGCGGCGCGC GCGTCGCCGT CGCCGATGCC
CAACTGTCGA AGGCCGGGCT GGAAGCGGCG ATCGCCGCCG CCGACATCCG GCTCCAGGTT
TCCCAGCTCT ATGTCGACGC CGTCGCCGCC GACCGCCGGC TGGCGATCGC CGTCGACCAG
GCCCGGATCG CGCGGGAGAC GCTGCGCGCG GCCGGCGTCC GGGTGCAGGC CGGCCGGGCG
TCGCCGATCG AGCAGCAGCG CGCCGACGTC GCCCGGATCA CCGCCGAGGC CGGCGTCGAG
CGGCAGGCGC GGCTGGCCGA GGCCGCCCGC GCCAATCTGG CGCGGCGGAT CGGGCGTCCG
ATCGACGGGG CGCTCGACGC GCGCCTGCTC GATCCGCCGC CATCCGCCCG CTTCGGGCCC
GAGCCGCCCG CCAGCGCCCA GGGAACCCTC GCCCTCGCGG CGGCGGAAGC GGACCTCGCG
GTCGCCGATG CCGGCGTGCG GCTGGCGCGG GCGAACCGCG TGCCCGACCT GACCGTCGGT
CCGGGGCTGC GCCGGCTGGC GGCGACCGAC GACACGGCGG CGGTGTTCAG CATCTCGATC
CCGATCCCGC TGCTCAACAA CGGCCGCGCC GCCGTGGCGC AGGCGCGGGC CGAACGCACC
CGCGCCGATG CCCGGTGGCG GATGACGGCG CAGGACGTCG AACAGGCGAT CACCGACGCC
CGGGTCGAGG CCGCCAATGC CGCGACCATG GCGCGGGCGG CGTCGGGCCC GGCGCTCGCC
GCCGCGCAGG AAGCCGCCCG GATCGCCCGG ATCGGCTATC GCGAAGGCAA ATTCGGGCAG
CTCGACCTGC TCGACGCCGA ACGGACCCTG GCCGAGATGC GCGTCGCCGC GATCGACGCC
CTCGCCAGCT ACCAGAACGC CCGCGCGCGG CTCGAACGGC TGACCGCCGC CGCGCCCATG
GGAGGACATC ATCCATGA
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| Protein sequence | MNRLLAAVLA AASCAAMAQA QTGQPASSTQ AAPVYTLDRA VLDAGGSAPA AEAAQAGIDA
ARAGRTVAGL RPNPVAEGQV ENIAGSGPYK GLRSAETTIG VALPIELGGK RGARVAVADA
QLSKAGLEAA IAAADIRLQV SQLYVDAVAA DRRLAIAVDQ ARIARETLRA AGVRVQAGRA
SPIEQQRADV ARITAEAGVE RQARLAEAAR ANLARRIGRP IDGALDARLL DPPPSARFGP
EPPASAQGTL ALAAAEADLA VADAGVRLAR ANRVPDLTVG PGLRRLAATD DTAAVFSISI
PIPLLNNGRA AVAQARAERT RADARWRMTA QDVEQAITDA RVEAANAATM ARAASGPALA
AAQEAARIAR IGYREGKFGQ LDLLDAERTL AEMRVAAIDA LASYQNARAR LERLTAAAPM
GGHHP
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