| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2607 |
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| Symbol | |
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| ID | 5200182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2888560 |
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| End bp | 2891745 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582163 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001263103 |
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| Protein GI | 148555521 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0578707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTC CCATCGTCAC CTGGGCGGTC GAGAAGCGCT GGCTCGTCCT GCTGCTCACC
GCCCTCGCCG CCGTCATCGG CGCCGTCTCG CTCCATCGGC TGCCGATCGA CGCGGTGCCC
GACATCACCA ACAACCAGGT CCAGATCAAC GTCCGGGTGC CCGCGCTGTC GCCCGAGCTG
GTCGAGAAGC AGATATCCTT CCCGATCGAG ACCGCGCTCG CCGGCATCCC CGGCCTCGAC
CACACCCGCT CGCTCAGCCG CAACGGCTTC GCCCAGGTCA CGGCGGTCTT CTCCGACGCG
ACCGACATCT ATTTCGCCCG CCAGCAGGTC GGCGAGCGGC TGCAGGGCGT GGCCGAGACG
CTGCCGGAGG GCGCCAATCC CGAAATGGGG CCGATCGCGA CCGGGCTGGG CGAGGTCTAT
ATGTGGACCG TCCGGCTCCA GCACCGCGAG GAGGACACCC ATCGTCCGGG CGAACCGGGC
CAGCAGCCTG ACGGCAGCTA CATCACCCCC GAGGGCGAGC GGCTGACCAG CGAGGCGGAC
AAGGCGACCT ATCTGCGCAC CGCGCAGGAC TGGATCGTCG CGCCGCTGCT CAAGAACACG
CCCGGCCTCG CCGGCATCGA CGCGATCGGC GGCTACACCA AGCAATATCT GGTCGTCCCC
GACGTCCAGA AGCTGGCGGC GCTCGGCCTG ACGCTCACCG ATCTCGGCAC CGCGCTCGAA
CGCAACAACA CGAGCGTCGG CGGCGGCTTC ATCAACCGCA ACGGCGAGGG GCTGGCGGTC
CGCTCCGACG CGCTGATCCG CAACGCGGCC GAGCTGGCGC GCGTCGTGGT GGCGACGCGC
GAGGGCGTGC CGATCACGCT CGACCAGGTC GCCAGCGTCC GCACCGGCCA GGCGATCCGC
ATGGGATCGG CGTCCGAGAA CGGGACCGAG GTGGTGGTCG GCACCGCGGT CATGCGGATC
GGCGAGAACA GCCGGACCGT CGCGACCGCG GTCGCCGATC GGCTGAAGGC GATCAACGCC
TCGCTGCCGC CCGACGTCGT CGTCCAGCCG GTGCTCGACC GCACCGCCTT GGTCAATGCG
ACGATCGCGA CGGTCGCGAA GAATCTCGGC GAGGGCGCGC TGCTGGTCGT CGTCGTGCTG
TTCCTGCTGC TCGGCAATGT CCGCGCGGCG CTGATCGCGG CGGCGGTCAT CCCGATCACG
ATGATGCTGA CCGGCTTCGG GATGCTGCGC GCCGGCGTCT CGGCCAATCT GATGAGCCTC
GGCGCGCTCG ACTTCGGCCT GATCGTCGAC GGCGCGGTGA TCATCGTCGA GAACGCGCTG
CGCCGGATGG CCGAGCGCCA GCACCGCGAG GACCGGCTGC TGACCGTGCC GGAGCGGCTG
GCGACGGTCG CCGCCGCGGC GCGCGAGATG ATCCGGCCGT CGGTCTACGG CCAGGCGATC
ATCATCCTCG TCTATGTCCC GCTGCTCACC CTGAGCGGGG TCGAGGGCAA GACCTTCGTG
CCGATGGCGC TCACCGTCAT CATCGCGCTG GCGGCGGCCT TCGTCTTGTC GCTGACCTTC
GTGCCCGCCG CGATCGCGGT CTGGCTGTCG AAGCGGGTCG AGGAGAAGGA CGGCCGGGTC
GTCGCCTGGC TCAAGCGGCG CTACGAGCCC GGGCTCGACC GGGCGATGCG CAGGCCGTCG
CTGACGATCG GCGCGGGCCT CGCCAGCCTC GCCGTCGCCG CGCTGGCCTT CCTCGCGCTG
GGGCGGGTGT TCCTGCCGCA GCTCGACGAG GGCGACCTGA TGATCCAGGC GCTGCGCATC
CCCGCGACCT CGGTCGAGCA GAGCCAGGCG ATGCAGGTGC CGATCGAACG GATGATGTCG
CGACAGCCCG AGGTGAAGTT CGTCTTCTCC AAGACCGGCA CGGCCGAGCT GGCCTCCGAT
CCGATGCCGC CCAACGCCAC CGACATGTTC GTGATCCTCA AGCCGCGCGA CCAGTGGCCC
GATCCCCGGC TGGCCAAGGC CGAACTGGTC GAGCGGCTGG AGGGCGAGCT CGCCCATTTC
CCCGGCAACG CCTATGAGAT CACCCAGCCG ATCCAGATGC GCTTCAACGA GCTGATCGCG
GGGGTGCGCG GCGACGTCGC GGTCAAGGTC TTCGGCGACG ACTTCGCGGC GATGAACCGG
ACGGCGGAGC AGATCGCCGC CATCCTGCGC CGCACCGCGG GCGCCGCCGA CGTCAAGGTC
GAGCAGACCA GCGGCCTGCC GATGCTCGAC ATCCGGGTAA ACCGCGACGC GATGGCGCGG
CTCGGGGTGA CCGCGCAAGA CGTCCAGGAC GTCGTCACCG CCACGATCGG CGGCCGGACC
TCGGGGATGA TCTTCGAGGG CGACCGGCGC TTTCCGGTCG TCGTCCGGCT GTCGGACGCC
CAGCGCGCCG ATCTCGGCCT GCTCCGCCAG GTGCAGGTGC CCGTCGCCGG CGGCCGCTAT
GTGCCGCTGT CGAGCGTGGC GGAGCTGCGC ATCGTCGACG GGCCCAACCA GATCGGCCGC
GAGAACGGCA AGCGCCGCGT CGTCGTCCAG GCCAATGTCC GCGGCCGCGA CGTCGGCGGG
GTCGTCGCCG ACGCCCAGGC GGCGATCGCC AAGCAGGTCC GGCTGCCCGC CGGCACCTAT
CTCGAATGGG GCGGGCAGTT CGAGAATCTC GAATCGGCCA CCGCGCGGCT GCGGCTGGTG
ATCCCGGCCT GCTTCGTCCT GATCCTGCTG CTGCTCTACG GCGCGCTGGG ATCGGTGCGC
GACGCCGCGA TCGTCTTCAC CGGCGTGCCC TTCGCGCTGG TCGGCGGCGT ATTGCTGCTG
CTGGTGCGCG GCATGGACTT CTCGGTCTCG GCCGCGGTCG GCTTCATCGC CTTGTCGGGG
ATCGCGGTGC TCAACGGCCT GGTGATGGTC AGCTCGGTCC AGGAGCTGGT CCGGTCGGGC
GTGGACCGGG CGGAGGCGGC GCGGCTCGGC GCGATCCAGC GGCTGCGCCC GGTGGTGATG
ACCGCGCTGG TCGCCAGCCT CGGCTTCGTG CCGATGGCCT TCGCGAGCGG GGCGGGAGCC
GAGGTGCAGA AGCCGCTCGC CACGGTCGTC ATCGGCGGCC TGATCTCGGC GACCTTGCTG
ACGCTGTTCG TGCTGCCGAC GCTCTATGCG CGCTTCGGCG GGAAGCGGGA GGCCAAGGGC
GATTGA
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| Protein sequence | MIAPIVTWAV EKRWLVLLLT ALAAVIGAVS LHRLPIDAVP DITNNQVQIN VRVPALSPEL
VEKQISFPIE TALAGIPGLD HTRSLSRNGF AQVTAVFSDA TDIYFARQQV GERLQGVAET
LPEGANPEMG PIATGLGEVY MWTVRLQHRE EDTHRPGEPG QQPDGSYITP EGERLTSEAD
KATYLRTAQD WIVAPLLKNT PGLAGIDAIG GYTKQYLVVP DVQKLAALGL TLTDLGTALE
RNNTSVGGGF INRNGEGLAV RSDALIRNAA ELARVVVATR EGVPITLDQV ASVRTGQAIR
MGSASENGTE VVVGTAVMRI GENSRTVATA VADRLKAINA SLPPDVVVQP VLDRTALVNA
TIATVAKNLG EGALLVVVVL FLLLGNVRAA LIAAAVIPIT MMLTGFGMLR AGVSANLMSL
GALDFGLIVD GAVIIVENAL RRMAERQHRE DRLLTVPERL ATVAAAAREM IRPSVYGQAI
IILVYVPLLT LSGVEGKTFV PMALTVIIAL AAAFVLSLTF VPAAIAVWLS KRVEEKDGRV
VAWLKRRYEP GLDRAMRRPS LTIGAGLASL AVAALAFLAL GRVFLPQLDE GDLMIQALRI
PATSVEQSQA MQVPIERMMS RQPEVKFVFS KTGTAELASD PMPPNATDMF VILKPRDQWP
DPRLAKAELV ERLEGELAHF PGNAYEITQP IQMRFNELIA GVRGDVAVKV FGDDFAAMNR
TAEQIAAILR RTAGAADVKV EQTSGLPMLD IRVNRDAMAR LGVTAQDVQD VVTATIGGRT
SGMIFEGDRR FPVVVRLSDA QRADLGLLRQ VQVPVAGGRY VPLSSVAELR IVDGPNQIGR
ENGKRRVVVQ ANVRGRDVGG VVADAQAAIA KQVRLPAGTY LEWGGQFENL ESATARLRLV
IPACFVLILL LLYGALGSVR DAAIVFTGVP FALVGGVLLL LVRGMDFSVS AAVGFIALSG
IAVLNGLVMV SSVQELVRSG VDRAEAARLG AIQRLRPVVM TALVASLGFV PMAFASGAGA
EVQKPLATVV IGGLISATLL TLFVLPTLYA RFGGKREAKG D
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