Gene Swit_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2600 
Symbol 
ID5200228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2881717 
End bp2882058 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content73% 
IMG OID640582156 
Producthypothetical protein 
Protein accessionYP_001263096 
Protein GI148555514 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.696113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG TCGACGTCGA TGTCGCGGGT CGCCGCTACC GCCTGAGCTG CCGCGACGGC 
GAGGAGGACC ATCTCCGCGC GCTCGTCCAC ATGGTCGGCA GCAAGGCCGA GGAGCTGACC
GGCGCGCTCG GCGAGATGAC CGAGGCGCGC ACCCTGCTGC TGTCGGCGCT GCTGCTCGCC
GACGAGCTCA ACGACCTGCG CGGCGCCGCC GCGGTCGCGC GCAAGGACCC GGCGCCCTCC
ACCGTCGCCG CCGAGCCCGA CCCCGCTTAT GCGGTCGCGA TCGAGCGCAT CGCCGAACGC
GTCGAGCGAC TCGCCGACCG GATGGAACGG GACGGACAGT AA
 
Protein sequence
MADVDVDVAG RRYRLSCRDG EEDHLRALVH MVGSKAEELT GALGEMTEAR TLLLSALLLA 
DELNDLRGAA AVARKDPAPS TVAAEPDPAY AVAIERIAER VERLADRMER DGQ