Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2596 |
Symbol | |
ID | 5200838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2879152 |
End bp | 2880183 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582152 |
Product | diguanylate cyclase |
Protein accession | YP_001263092 |
Protein GI | 148555510 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGAAG AAAGAATAGC CGAGAAGTCT GCTGCGCGCG CCGAATGGCG GCGTCTGTAC GACATGATCG GCAAGCTTCT GTTCGATCAC GGGCTGGAAC CGTCCCCGGC GAATTTCGAA TTGTGCCACC GCTATCTGTC GGGTCGCGAC GCTGCGCTCA ACGCGACGAT CGACCGCGCG ATCGCCAAGG ACGGCGGGCT GACCGACGCC GTCGCCGGTA CGATCGCCAC CCGGCTGGAC CCCGGCCTGT CGACCGACGA ACTGTCGCGC ATGGCGCTGG AGGCGCAGGG CTATCTCGAG CAGATGACGA CGATCCTCGC CCGCTCGGGC GAGGACGCGC GCGACTATGG CGAGGCGCTG GCGCACGAGG CCGAGGGGCT GGCGGCGGAC GGATCGCCCG CGCTCGCGGT CAAGAAGCTG GTCGGCCTGA CCCGGACGAT GATCGACAAG GCGCAGGCGG CCGAGGAGGA CCTGCGCCGC ACCGAGCAGC AGATGAGCGC GATGCGCAAG GACCTCGCCG CGGCGCATCG CAAGGCGAAC AGCGATCCGC TCACCGGCCT GCCCAACCGC CGCGCGCTCG ACCAGCATCT GCGCGGCGCG TTCGAGAATG CCCGCCGCGC CGCCACGCCG CTCGCGCTGG CGATCTGCGA CATCGACCAT TTCAAGCAGT TCAACGACAC CCATGGCCAC CAGATCGGCG ACGAGGTGAT CAAGTTCGTC GCCTCCTCGC TCGGCCGCGC CGCCAGCGGC GACGTGTTCG TCGCGCGCTA TGGCGGCGAG GAATTCGTGA TGGTGTTCGA GCGTGGCGCC GCCGCCAAGG CGATGGCGAC CCTCGACAAG ATCCGCGCCG CGATCGCCGC GCGCGAGCTC AAGGTGACGC ACACCGGCCA GTCGCTCGGC CGGCTGAGCT TCTCGGGCGG GCTCGCCGCG CTCGATCTCC AGGATTCGCC GGGCTCGATC CTCAAGCGCG CCGACGCCGC GCTCTACCGG GCCAAGCAGG ACGGCCGCAA CCGCATCCAC GCGGCGGAGT GA
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Protein sequence | MKEERIAEKS AARAEWRRLY DMIGKLLFDH GLEPSPANFE LCHRYLSGRD AALNATIDRA IAKDGGLTDA VAGTIATRLD PGLSTDELSR MALEAQGYLE QMTTILARSG EDARDYGEAL AHEAEGLAAD GSPALAVKKL VGLTRTMIDK AQAAEEDLRR TEQQMSAMRK DLAAAHRKAN SDPLTGLPNR RALDQHLRGA FENARRAATP LALAICDIDH FKQFNDTHGH QIGDEVIKFV ASSLGRAASG DVFVARYGGE EFVMVFERGA AAKAMATLDK IRAAIAAREL KVTHTGQSLG RLSFSGGLAA LDLQDSPGSI LKRADAALYR AKQDGRNRIH AAE
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