| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2590 |
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| Symbol | |
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| ID | 5196140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2872201 |
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| End bp | 2873022 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 640582146 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001263086 |
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| Protein GI | 148555504 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC GCCAGGCCTC CCGCGCCGCC GATATCTTCA CCGGCCTCGT CGTCGCCTCG
GTCGCGGTCG CGCTGGCCGG ACTGACCTGG CACCTGTTCG GCGCCGGCCC TGCCGATCCG
CCCCAGGCCA CGGGCGCCGC GCCTATGGCC GCGACCGACA TCGCCCCGGC GCTGGCGCTC
GCCCCCTTCG GGCGGCCCGA CGCCTCCTCG GCCCAGCCGA CCAGCCTCGC GCTCCAGCTG
CGCGGCGTGA TCCTCGCCGA TCCGCCCTCC GCCTCGACCG CGCTGATCGC GCCGCCCGGC
GGCCGCCCCG TCTCCTATGC GGTCGGCGCG TCGGTCGGCG GCGCGACGAT CGAGGAGATC
GCCTTCAACC GGGTGCTGCT GCGGAACAAC GGGCGGCTCG AACGGCTCGA CCTGCCGCGC
CCGTCGCTGG GCGGCGAGGC CGCGTCGGCG ACCACGCCCC CCCCACCGCC GCCGCCCGGT
GCGGTGCCCG CGACCGGCCC GTCCGACGGA TCGGGGCCGC AGCCGATGCA GGCGATCACG
CCGCCACCAG GCGCGCCCAA CGGCGCGAGC GCCGCCTCGC TGCTCGACGG GCTCGGCGCG
GCGCCGGTCG GCGGCGCCTA TCGCATCGGC GCCGATCCCT CGCCCGCCGC GCGCAAGGCC
GGGCTGCTGC CCGGCGACGT GATCGAGCGG ATCAACGGCC TGCCCGCCAC CGCCGTCACC
GCCGACCGCC AGCTGATGGC CCAGGTCATG GCCGGCGGCC CCGCCCAGAT CGACGTGCTG
CGCGGCGGCA AGCGCGTCTC CTTCTCCTTC GCCCTCCGTT GA
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| Protein sequence | MTPRQASRAA DIFTGLVVAS VAVALAGLTW HLFGAGPADP PQATGAAPMA ATDIAPALAL
APFGRPDASS AQPTSLALQL RGVILADPPS ASTALIAPPG GRPVSYAVGA SVGGATIEEI
AFNRVLLRNN GRLERLDLPR PSLGGEAASA TTPPPPPPPG AVPATGPSDG SGPQPMQAIT
PPPGAPNGAS AASLLDGLGA APVGGAYRIG ADPSPAARKA GLLPGDVIER INGLPATAVT
ADRQLMAQVM AGGPAQIDVL RGGKRVSFSF ALR
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