Gene Swit_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2589 
Symbol 
ID5196139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2871803 
End bp2872204 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content77% 
IMG OID640582145 
Productgeneral secretion pathway protein I 
Protein accessionYP_001263085 
Protein GI148555503 
COG category 
COG ID 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG CCGCCCACGG CCGCCCCGGC GAGGCCGGCT TCTCGCTGAT CGAGGCGCTG 
GTGGCGCTGC TGGTGCTCGC CATCGCCGCC GCCGGCCTGG TCCGCGCGGC CGAGGCGCAT
GTCGATTCGA TCCGCGGCCT CGAACGCCGC GCCGCAGCCC AGCTCGTCGC GCAGAACCGG
CTCGCCGAGC TGGCGGTGCC CGGCCTGCCC GCCGGCCCGG CGCAGGTCGA GATGCTCGGC
CAGCGCTGGG CCGTCGCGGT GCGCGAGAGC GCCACCGACG ATCCCGACAT GGCCAGGCTC
AGCGTCGCCG TGGCGGACGC GCGCGATCCG GCATCACCGC TCGTCACCCT CGACGGCTTC
CGCGACAGGG GCACGACCAC GGGGGGCACG ACGACGCGAT GA
 
Protein sequence
MTPAAHGRPG EAGFSLIEAL VALLVLAIAA AGLVRAAEAH VDSIRGLERR AAAQLVAQNR 
LAELAVPGLP AGPAQVEMLG QRWAVAVRES ATDDPDMARL SVAVADARDP ASPLVTLDGF
RDRGTTTGGT TTR