Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2589 |
Symbol | |
ID | 5196139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2871803 |
End bp | 2872204 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640582145 |
Product | general secretion pathway protein I |
Protein accession | YP_001263085 |
Protein GI | 148555503 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGG CCGCCCACGG CCGCCCCGGC GAGGCCGGCT TCTCGCTGAT CGAGGCGCTG GTGGCGCTGC TGGTGCTCGC CATCGCCGCC GCCGGCCTGG TCCGCGCGGC CGAGGCGCAT GTCGATTCGA TCCGCGGCCT CGAACGCCGC GCCGCAGCCC AGCTCGTCGC GCAGAACCGG CTCGCCGAGC TGGCGGTGCC CGGCCTGCCC GCCGGCCCGG CGCAGGTCGA GATGCTCGGC CAGCGCTGGG CCGTCGCGGT GCGCGAGAGC GCCACCGACG ATCCCGACAT GGCCAGGCTC AGCGTCGCCG TGGCGGACGC GCGCGATCCG GCATCACCGC TCGTCACCCT CGACGGCTTC CGCGACAGGG GCACGACCAC GGGGGGCACG ACGACGCGAT GA
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Protein sequence | MTPAAHGRPG EAGFSLIEAL VALLVLAIAA AGLVRAAEAH VDSIRGLERR AAAQLVAQNR LAELAVPGLP AGPAQVEMLG QRWAVAVRES ATDDPDMARL SVAVADARDP ASPLVTLDGF RDRGTTTGGT TTR
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