Gene Swit_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2587 
Symbol 
ID5196746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2870860 
End bp2871345 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID640582143 
Productgeneral secretion pathway protein G 
Protein accessionYP_001263083 
Protein GI148555501 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATAG TTTCGCAACA TTTTCATGAC GAGCCCGAAC ATGACGGCCG GCGCGCCCCT 
TCGGATGGCG AGGCTGGCCT GACCCTGATC GAGATGATCG TCGTGCTGGC GATCATCGCG
CTGGTCGCGG CGCTGATCGT CCCCAACGTC ATCGGCCGTC CCGATGAAGC GCGCGTGACG
GTCGCCAAGA CCGACCTGCG CACCATCTCC GCCGCGCTGA AGATGTATCG CCTCGACAAT
GGCGACTATC CGACCACCGA GCAGGGGCTG GCGGCATTGT CGAGGAAGCC GGCCACCGCG
CCCGAGCCGC GCAACTGGTC GGCCGAGGGC TATCTGGCGC AGGTGCCGGT CGACCCCTGG
GGCCGCCCCT ATGTCTATCG CAATCCCGGC AGCGGCGGCG CGGGCTTCGA CCTGGTCAGC
CTGGGCAAGG ACGGCAAGCC CGGCGGCGAG GGGCTCGACG CCGACCTGAG CGACAAAGCG
CCCTGA
 
Protein sequence
MIIVSQHFHD EPEHDGRRAP SDGEAGLTLI EMIVVLAIIA LVAALIVPNV IGRPDEARVT 
VAKTDLRTIS AALKMYRLDN GDYPTTEQGL AALSRKPATA PEPRNWSAEG YLAQVPVDPW
GRPYVYRNPG SGGAGFDLVS LGKDGKPGGE GLDADLSDKA P