Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2587 |
Symbol | |
ID | 5196746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2870860 |
End bp | 2871345 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640582143 |
Product | general secretion pathway protein G |
Protein accession | YP_001263083 |
Protein GI | 148555501 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01710] general secretion pathway protein G [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATAG TTTCGCAACA TTTTCATGAC GAGCCCGAAC ATGACGGCCG GCGCGCCCCT TCGGATGGCG AGGCTGGCCT GACCCTGATC GAGATGATCG TCGTGCTGGC GATCATCGCG CTGGTCGCGG CGCTGATCGT CCCCAACGTC ATCGGCCGTC CCGATGAAGC GCGCGTGACG GTCGCCAAGA CCGACCTGCG CACCATCTCC GCCGCGCTGA AGATGTATCG CCTCGACAAT GGCGACTATC CGACCACCGA GCAGGGGCTG GCGGCATTGT CGAGGAAGCC GGCCACCGCG CCCGAGCCGC GCAACTGGTC GGCCGAGGGC TATCTGGCGC AGGTGCCGGT CGACCCCTGG GGCCGCCCCT ATGTCTATCG CAATCCCGGC AGCGGCGGCG CGGGCTTCGA CCTGGTCAGC CTGGGCAAGG ACGGCAAGCC CGGCGGCGAG GGGCTCGACG CCGACCTGAG CGACAAAGCG CCCTGA
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Protein sequence | MIIVSQHFHD EPEHDGRRAP SDGEAGLTLI EMIVVLAIIA LVAALIVPNV IGRPDEARVT VAKTDLRTIS AALKMYRLDN GDYPTTEQGL AALSRKPATA PEPRNWSAEG YLAQVPVDPW GRPYVYRNPG SGGAGFDLVS LGKDGKPGGE GLDADLSDKA P
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