| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2584 |
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| Symbol | |
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| ID | 5196743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2867667 |
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| End bp | 2869127 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582140 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001263080 |
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| Protein GI | 148555498 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.855979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGG CGCTTCCCTA CGGCTTCGCC CGCCGCCACG GCGTCCTCGT CCAGCCCGCG
GGAGACGGCG GCGCGCGCTG CCTGTTCCGC GCCGGCGCCA GCCCCGAGGC GATGCTCGAG
GTGCAGCGCC GCTTCGGCGC CGGCCTCGCC TTCGAGCCGG TGGCCGAGGA GGCGTTCGAG
AGCGCCGTCG CCGCCGCCTA TCGCGACAGC GCGGGCGGGA CGATGGACCT CGCCGGCACC
GACGACTTGG CGACGCTGGC GGACAGCGCG GCGGCGGTCG ACGACCTGCT CGACAGCCGC
GACGACAGCC CGGTGATCCG CCTGATCAAC GCGTTGCTGC TCCAGGCGGT GCGCGACGGC
GCGTCGGACA TCCATGTCGA GACGCAGGAG AAAAGGCTGA TCGTCCGCTT TCGCATCGAC
GGCGTGCTGC GCGACGTGGT CGAGCCGAAG CGCGCGCTGG CGCCGCTGCT GGTCAGCCGC
ATCAAGGTGA TGGCGCGGCT CGACATCGCC GAGAAGCGGG TGCCGCAGGA CGGCCGCGTC
ACCCTGCGGG TCGGCGGCTA CGACATCGAC GTGCGCGTCT CGACCATCCC GACCCAGCAT
GGCGAGCGGG TGGTGATGCG CCTGCTCGAT CGCGGCTCGA CCGGGCTCGA CACCGCCGCG
CTCGGCCTGT CGGAGCGCGA CCGCGACGTC TTCCTCGGCC TGCTCGACCG GCCGCACGGC
ATATTGCTCG TCACCGGCCC GACCGGATCG GGCAAGACGA CGACGCTCTA CACCGCGCTC
ACCCACCTCA ACGACCGCAA GCGCAACATC ATGACGGTCG AGGACCCGAT CGAATATGAG
CTGGCGGGCG TCGCCCAGAC CCAGGTCAAC GCCCGGACGG GAATGACCTT CGCGCGTGGC
CTGCGCGCCA TCCTGCGCCA GGACCCCGAC GTGATCATGG TCGGCGAGAT CCGCGACCAG
GAGACCGCCG AGGTCGCGGT GCGATCGTCG ATGACCGGCC ATTTCGTGCT GTCGACGCTG
CACACCAACA GCGCGATCGG GTCGATCACC CGGCTGATCG ACATGGGGGT GGAGCGCTAC
CTGCTCGCGC CGATGGTGGT CGGGCTGATC GCCCAGCGGC TGGTGCGGCG GCTGTGCGAG
CATTGCCGCT GGCAGGACCG CGCGACCGAG GCCGATTCGG CGCTGCTCGG CCGCGCGCTC
AAGCCCGGCA AGAAGATCTG GCGCGCGCAG GGCTGCGAAC ATTGCCATGG CGAGGGCTAT
AAGGGCCGGA TGGCGCTGTA CGAGGTGGTC GCCGCCGACG ACGAGCTGCG CCGCCTGATC
CACGACGGCG CGTCGGAGGC GGAGCTGACC GCCGCCGCGC GCAAGGCCGG GCCGAGCCTG
CTCGACGACG GCATCGCCAA GCTGCGCGCC GGCCTCACCA CGATCGAGGA AGTCGCCCGC
GTCGTCCAGG ACGAGGGCTG A
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| Protein sequence | MTEALPYGFA RRHGVLVQPA GDGGARCLFR AGASPEAMLE VQRRFGAGLA FEPVAEEAFE
SAVAAAYRDS AGGTMDLAGT DDLATLADSA AAVDDLLDSR DDSPVIRLIN ALLLQAVRDG
ASDIHVETQE KRLIVRFRID GVLRDVVEPK RALAPLLVSR IKVMARLDIA EKRVPQDGRV
TLRVGGYDID VRVSTIPTQH GERVVMRLLD RGSTGLDTAA LGLSERDRDV FLGLLDRPHG
ILLVTGPTGS GKTTTLYTAL THLNDRKRNI MTVEDPIEYE LAGVAQTQVN ARTGMTFARG
LRAILRQDPD VIMVGEIRDQ ETAEVAVRSS MTGHFVLSTL HTNSAIGSIT RLIDMGVERY
LLAPMVVGLI AQRLVRRLCE HCRWQDRATE ADSALLGRAL KPGKKIWRAQ GCEHCHGEGY
KGRMALYEVV AADDELRRLI HDGASEAELT AAARKAGPSL LDDGIAKLRA GLTTIEEVAR
VVQDEG
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