| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2571 |
|---|
| Symbol | |
|---|
| ID | 5198497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2850949 |
|---|
| End bp | 2851602 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640582127 |
|---|
| Product | deaminase-reductase domain-containing protein |
|---|
| Protein accession | YP_001263067 |
|---|
| Protein GI | 148555485 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0230087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCA AGGTTCGCGC GGCGGGCTTT TCGATCTCGC TCGACGGTTT CGGCGCCGGC
GCCGGCCCCG GCCAGAGCCT CGCCGACCCG CTGGGGCATC GCGGCACCGA GCTGCACCAA
TGGTATTTCG CGACGCGCAG CTTCCGGGCG ATGATCGGCG AGGAGGGCGG CGACACCGAC
GGCGTCGACG CGGTCCATGC CCGCCGCGCG ATGGAGGGGT TCGGCGCGCA CATCCTCGGC
CGCAACATGT TCGGGCCGGT GCGCGGCCCC TGGAACGGCG ACGAATGGAC GGGCTGGTGG
GGCGACGAAC CGCCGTTCCA TGCGTCGACC TTCATCCTCA CCCACCACCG GCGCGACCCG
CTGGTGATGG CGGGCGGCAC CGTCTTCCAC TTCGTCACCG ACGGGATCGG CGCGGCGCTG
GAGCAGGCGA AGGCGGCGGC CGGCGATCGC GACGTCAAGA TCGGCGGCGG CGTGTCGACG
CTGCGCCAAT ATCTGGCCGC GGGGCTGGTC GACGAGCTGC ATCTCGCGAT CGCGCCGGTG
CTGCTCGGCC GCGGCGAGGC GCTGTTCGCG GGGCTCGACC TTCCCGCGCT CGGCTATAGG
GTGCTCTCCA GCGAAGCCGG CGAGGCCGCC CGGCATGTCA TCATCGGCCG ATGA
|
|---|
| Protein sequence | MMSKVRAAGF SISLDGFGAG AGPGQSLADP LGHRGTELHQ WYFATRSFRA MIGEEGGDTD
GVDAVHARRA MEGFGAHILG RNMFGPVRGP WNGDEWTGWW GDEPPFHAST FILTHHRRDP
LVMAGGTVFH FVTDGIGAAL EQAKAAAGDR DVKIGGGVST LRQYLAAGLV DELHLAIAPV
LLGRGEALFA GLDLPALGYR VLSSEAGEAA RHVIIGR
|
|---|
| |