| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2567 |
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| Symbol | |
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| ID | 5199024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2847211 |
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| End bp | 2848734 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582123 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001263063 |
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| Protein GI | 148555481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0275493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTCG GGCGTGTTAA GCCTCTCGAC GCCATTCTCG CCACCGCAGC GAAAAAGTCG
CTGCACCGAT CGCTAGGGCC GTTCCAGCTC ACCATGCTGG GGATCGGCGG CATCATCGGA
ACCGGTATCT TCGTTCTCAC CGCCGAAGCC GCGCAGAAGG CCGGCCCCGG CATGATGCTC
AGCTTCGTGA TCGCCGGCTT CGTCTGCGCG GTCGCGGCGC TCTGCTATGC CGAGATGGCG
GCGATGGTGC CGGTGTCCGG CTCCGCCTAC ACCTACAGCT ACGCCGTGAT GGGCGAACTG
GTCGCCTGGA TGGTCGGCTG GGCGCTCGTC CTCGAATATG CGATCGCCGC CGGCGCGGTG
TCGGTCGGAT GGTCGGGCTA TGTCGTCGGC CTGTTCCAGT CGCTGACGGG GATAACCGTG
CCCAAGGAAC TGGTGCTCGG CCCGATCGAC GGCGGCATCG TCAACATCCC CGCCGCGATC
ATCGCGCTGC TCGTCACCTG GCTGCTGGTG CTCGGCACCA AGGAAAGCGC CACCGTCAAC
GCCGTGCTGG TCGGCATCAA GGTCGCCGCG CTGTCGCTGT TCGTGGTGCT GGCGCTGCCG
GTGATGAACA TGAACAATTT CGATCCCTTC GCCCCGCTCG GCTTCGCCGG CATCTCGGCG
GCGGCGGCAT CGATCTTCTT CGCCTATGTC GGCTTCGACG CGGTCTCGAC CGCCGCCGAG
GAGACCAAGA ATCCCCAGCG CAACATGCCG ATCGGCCTGA TCGGCTCGCT CGGCATCTGC
ACCGTCTTCT ACATGCTCGT CGCCGCCGGC GTGATCGGCG GCGTCGGCGC CCAGCCGATG
CTCGACGCCT CGGGCGCCGC CATCCCCACC GGCTCGCCCG CGCTGGCGCA GGCCTGCTCG
GCGATCGGCG ACGCCAAGGT CGTCTGCTCG AAGGAGGCGC TGGCCTGGAC CCTGCGCGAG
ATCGGCTACA AGGAGATCGG CAACCTGCTC GGCCTGGCCG CCGGCCTCGC CCTTCCCTCG
GTCATCCTGA TGATGATGTT CGGCCAGACC CGCATCTTCT TCGTGATGAG CCGCGACGGC
CTGCTGCCGG GCGTCTTCTC GCGCATCCAT CCGCGCTTCA AGACGCCGCA TGTCGTTACG
GTCATGACCG GTATCTTCGT GGCGATCTTC GCCGCGCTGT TCCCGGTGGG CGCGCTCGCC
GACATCTCCA ATTCGGGCAC GCTGTTCGCC TTCGCCGCGG TGTCGATCGC GGTGCTGGTG
CTGCGCCGGA CCGATCCGAA CCGCAGCCGC CCCTTCCGCA CCCCGGCGGT GGCGCTCGTC
GCTCCGATCG CGACGATCGG CTGCATCTAC CTGTTCTTCA GCCTGTCGCG CTACACGATC
ACGCTGTTCT TCAGCTGGGC GGCGGTCGGG CTGATCGTCT ATTTCCTGTA CGGCTATCGG
AAGAGCAACC TCGGCCGGGG CATCGTCGAG ACGCACGAGA CCGATCCCGA CGCGCCGCCG
CAGCCGGTGC CGCCGATCGA GTGA
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| Protein sequence | MIFGRVKPLD AILATAAKKS LHRSLGPFQL TMLGIGGIIG TGIFVLTAEA AQKAGPGMML
SFVIAGFVCA VAALCYAEMA AMVPVSGSAY TYSYAVMGEL VAWMVGWALV LEYAIAAGAV
SVGWSGYVVG LFQSLTGITV PKELVLGPID GGIVNIPAAI IALLVTWLLV LGTKESATVN
AVLVGIKVAA LSLFVVLALP VMNMNNFDPF APLGFAGISA AAASIFFAYV GFDAVSTAAE
ETKNPQRNMP IGLIGSLGIC TVFYMLVAAG VIGGVGAQPM LDASGAAIPT GSPALAQACS
AIGDAKVVCS KEALAWTLRE IGYKEIGNLL GLAAGLALPS VILMMMFGQT RIFFVMSRDG
LLPGVFSRIH PRFKTPHVVT VMTGIFVAIF AALFPVGALA DISNSGTLFA FAAVSIAVLV
LRRTDPNRSR PFRTPAVALV APIATIGCIY LFFSLSRYTI TLFFSWAAVG LIVYFLYGYR
KSNLGRGIVE THETDPDAPP QPVPPIE
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