| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2564 |
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| Symbol | rplA |
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| ID | 5199021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2845021 |
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| End bp | 2845719 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582120 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001263060 |
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| Protein GI | 148555478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0511824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC TGAGCAAGAA GCAGAAGAAC CAGGCCGCGT CGGTCGACAG CCAGAAGCTG
TACGGCGTCG ATGAGGCGAT CGCCCTCGCC AAGCAGAACG CCACGTCGAA GTTCGACGAG
ACGATCGAGG TCGCGCTGAA CCTGGGCGTC GATCCGCGCC ACGCCGACCA GATGGTCCGC
GGCGTCGTCA CCCTGCCCAA GGGCACCGGC AAGGACGTCC GCGTCGGCGT GTTCGCCCGC
GGCGCCAAGG CCGACGAAGC CAAGGCCGCC GGTGCCGAGG TCGTCGGCGC CGAAGACCTG
CTCGAGACGA TCCAGGGCGG CACGGTCGAC TTCGACCGCT GCATCGCGAC CCCGGACATG
ATGGGCCTGG TCGGCCGCCT CGGCAAGATC CTGGGCCCGA AGGGCCTGAT GCCGAACCCG
AAGCTCGGCA CCGTGACGAT GAACGTCGCC GAAGCCGTCA AGGCGGCCAA GGGCGGCCAG
GTGGAGTTCC GCGTCGAGAA GGCCGGCATC ATCCACTCGG GCATCGGCAA GGCGAGCTTC
CCGGCCGAGG ACCTGCGCGC CAATTTCGAC GCGTTCGTCG ACGCGATCGT CAAGGCGAAG
CCGACCGGCG CCAAGGGCAA GTACCTCAAG AAGGCCGCCG TCAGCTCGAC CATGGGCCCG
GGCGTGAAGA TCGACGTGGC GGACGTCGCC GGCGCCTGA
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| Protein sequence | MAKLSKKQKN QAASVDSQKL YGVDEAIALA KQNATSKFDE TIEVALNLGV DPRHADQMVR
GVVTLPKGTG KDVRVGVFAR GAKADEAKAA GAEVVGAEDL LETIQGGTVD FDRCIATPDM
MGLVGRLGKI LGPKGLMPNP KLGTVTMNVA EAVKAAKGGQ VEFRVEKAGI IHSGIGKASF
PAEDLRANFD AFVDAIVKAK PTGAKGKYLK KAAVSSTMGP GVKIDVADVA GA
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