Gene Swit_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2563 
SymbolrplK 
ID5199020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2844585 
End bp2845016 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID640582119 
Product50S ribosomal protein L11 
Protein accessionYP_001263059 
Protein GI148555477 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0498001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AGATCACGGG CTATATCAAG CTCCAGGTGC CCGCTGGAAA GGCGAATCCG 
TCGCCGCCGA TCGGCCCCGC GCTCGGTCAG CGCGGCGTCA ACATCATGGA CTTCTGCAAG
GCGTTCAACG CCCAGACCGG TGATTTCGAG GTCGGCACCC CGCTGCCGAC GATCATCACC
GTCTATGCGG ACCGTTCGTT CAGCTTCGTC ACCAAGACCC CGCCGGCGAC CTATCTGATC
AAGAAGGCGA TCAACCTGAA GTCGGGCTCG AAGGAGCCGG GCAAGGCGAG CGCCGGCAAG
ATCAAGCGGT CGCAGCTGGC CCAGATCGCC GAAGTGAAGA TGAAGGATCT CAACGCCAAC
GATATCGAGT CGGCGACCCG CATCATCGAA GGCTCGGCCC GCGCGATGGG CCTCGAAGTG
GTGGAGGGCT GA
 
Protein sequence
MAKKITGYIK LQVPAGKANP SPPIGPALGQ RGVNIMDFCK AFNAQTGDFE VGTPLPTIIT 
VYADRSFSFV TKTPPATYLI KKAINLKSGS KEPGKASAGK IKRSQLAQIA EVKMKDLNAN
DIESATRIIE GSARAMGLEV VEG