| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2559 |
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| Symbol | |
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| ID | 5200816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2840820 |
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| End bp | 2842544 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582114 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001263055 |
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| Protein GI | 148555473 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0309025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGG TGCCGACGCC GACAGCCGAC GCGCTGCCGC GCCGTTTCTC CGATTTCGAT
ACGCTGGGCG CGGCCCTCGA CTATGCCGCG ACCGGCACGC GGGGGCTGAA TTTCCATGAC
GCCCGCGGCA CGCTGACGCG CCCCTATCCC TTCGCCGAGC TGCGCGCCGA GGCGCTGGCC
AATGCCGGCC GGCTGGTCGC GGCTGGGGTG CGCCCCGGCG ACCGCATCGC CCTGATCGCC
GAGACGGGAA CCCATTTCGC CGCGCTGTTC TTCGGCGCGG TCTATGCCGG CGCCTGGCCG
GTGCCGCTGC CGCTGCCGAC CTCGTTCGGC GGCAAGGACA GCTATATCGA CCAGCTTGCC
GTCCAGCTCG GCAGCTCGGA CCCGACGCTG CTCTTCTTCC CCGAGGAACT GGCCGAGATG
GCGACCGCCG CCGCCGCGCT GCGCGGGGTG AAGGCGCTGA GCTACGAGGC GTTCGAGGCG
CGCGAGGCGG TCGACGCGAT CCTGCCGCAG GCGTCGCCCG ACGACATCGC CTATCTGCAA
TATTCGAGCG GATCGACCCG CTTCCCGCAC GGCGTCGCCG TCACCCACCG CGCGCTGCTC
AACAACCTCG CCGCGCACAG CCACGGCATG CTGCTCGAAC CGCAGGACCG CTGCATCAGC
TGGCTGCCCT GGTATCACGA CATGGGGCTG GTCGGCTGCT TCCTGTCGCC GATCGCCAAC
CAGGTGTCGG TCGACTATCT GAAGACCGAG GACTTCGCCC GCCGCCCGCT TGCCTGGCTC
GACCTGATCA GCCGCAACGA GGGCACCTCG ATCAGCTATT CGCCGACCTT CGGCTACGAC
ATCTGCGCGC GCCGCATGTC GAGCCAGACC AAGGCGTCGG ACCGCTTCGA CCTGTCGCGC
TGGCGGCTCG CCGGCAACGG CGCCGACATG ATCCGCCCCG ACGTGATGCA GTCCTTCGTC
GACGCCTTCG CCGAGGCCGG CTTCAAGGCG ACCGCCTTCC TGCCGAGCTA CGGCCTGGCC
GAGGCGACGC TCGCCGTCTC GATCATGCCG CCGGGCGAGG GCATCGTCGT CGAGCTGGTC
GAGGAGACCC AGCTTTCGGG CGGCGACCAC AGCAAGGACC GGCCGCGCCG CTTCCGCGCG
ATCGTCAATT GCGGCAAGCC GGTGCGCGAC ATGACGGTCG AGATTCGCGA CGATGACGGA
TCGCCGCTGC CCGACAAGAT GATCGGCAAG CTGTGGGCCA AGGGCCCGTC GATCATGACC
GGCTATTTCC GCGACGAGGA GGCGACCGAC GCCTGCATGG TCGACGGCTG GCTCGACACC
GGCGACATGG CCTATATGTC CGACGGCTAT ATCTACATCG TCGGCCGCGC CAAGGACATG
ATCATCATCA ACGGCAAGAA CCACTGGCCG CAGGACATCG AGTGGGCGGT GGAGCAGCTT
CCCGGCTTCA AGGCCGGCGA CATCGCCGCC TTCGCGATCA CCACCCCGGG CGGCGAGGAG
ACCCCCGCCG TGCTCGTCCA GTGCCGCACC TCCGACCCCG AGGAGCGCGC CCGGCTGCGC
GACCAGATCC GCGAGAAGGT CCGCGCGATC ACCGGCATGC ACTGCGTGGT CGAGCTGGTG
CCGCCGCGCA CCCTGCCCAA GACCAGCTCG GGCAAGCTGA GCCGCGCCAA GGCGCGCAAC
CTCTATCTGT CGGGCGAGAT CCAGGGCTAC GACATCGCCG CATGA
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| Protein sequence | MALVPTPTAD ALPRRFSDFD TLGAALDYAA TGTRGLNFHD ARGTLTRPYP FAELRAEALA
NAGRLVAAGV RPGDRIALIA ETGTHFAALF FGAVYAGAWP VPLPLPTSFG GKDSYIDQLA
VQLGSSDPTL LFFPEELAEM ATAAAALRGV KALSYEAFEA REAVDAILPQ ASPDDIAYLQ
YSSGSTRFPH GVAVTHRALL NNLAAHSHGM LLEPQDRCIS WLPWYHDMGL VGCFLSPIAN
QVSVDYLKTE DFARRPLAWL DLISRNEGTS ISYSPTFGYD ICARRMSSQT KASDRFDLSR
WRLAGNGADM IRPDVMQSFV DAFAEAGFKA TAFLPSYGLA EATLAVSIMP PGEGIVVELV
EETQLSGGDH SKDRPRRFRA IVNCGKPVRD MTVEIRDDDG SPLPDKMIGK LWAKGPSIMT
GYFRDEEATD ACMVDGWLDT GDMAYMSDGY IYIVGRAKDM IIINGKNHWP QDIEWAVEQL
PGFKAGDIAA FAITTPGGEE TPAVLVQCRT SDPEERARLR DQIREKVRAI TGMHCVVELV
PPRTLPKTSS GKLSRAKARN LYLSGEIQGY DIAA
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