Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2557 |
Symbol | |
ID | 5196563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2839420 |
End bp | 2840016 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582112 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_001263053 |
Protein GI | 148555471 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.557959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.17098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGA AGTCTGTTGC GTCTGTAACG TTGCGCGACG TCAGCGTGGA CAGCGGGCAG GAATGCGTGT CGCCGGCTGC CGGCGAACCC GCCGAGACCG TCGTGGGCGC GGTGAAATGG TTCGACGCCA CCCGCGGGTT CGGTTTCATC GCCACCGATG GTGATCGCGG CGACGTGCTC GTCCATTTTT CCGTGCTGCG CGACCATGGC CGCCGGACCC TGCCCGAAGG CGCGCGCATC GCGTGCGAGG TGGTGGCGCG CGACCGCGGC CTGCAGGCGC GCCGCATCCT CGCGATCGAC CTGTCGACCG CGACCGGCCC CGATCCCGAC CTGATCGCCA AGCGCAACGC CGACCGCGTC GATCCGACCC AGCTGGTCGA CCAGGCGGGC GAGCCCGAGC CGGTCATCGT CAAATGGTTC AACCGCCTGA AGGGCTATGG CTTCCTCGTC CGCGACGGCG AGACCCAGGA CATCTTCATC CATATGGAGA CGGTCCGCCG CGCCGGCCTG CCCGACCTTC TTCCCGAGAC GCGGATGAAG GCGCGCATCG CCGAGGGCCG CAAGGGCCCG CTGGCGGTCG AGCTGATCAC CGACTGA
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Protein sequence | MNEKSVASVT LRDVSVDSGQ ECVSPAAGEP AETVVGAVKW FDATRGFGFI ATDGDRGDVL VHFSVLRDHG RRTLPEGARI ACEVVARDRG LQARRILAID LSTATGPDPD LIAKRNADRV DPTQLVDQAG EPEPVIVKWF NRLKGYGFLV RDGETQDIFI HMETVRRAGL PDLLPETRMK ARIAEGRKGP LAVELITD
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