Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2556 |
Symbol | |
ID | 5196562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2838941 |
End bp | 2839417 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640582111 |
Product | hypothetical protein |
Protein accession | YP_001263052 |
Protein GI | 148555470 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.601199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.165278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCGC CGCTGCGGCT GATCGGCGCG TTCGGCGCCC TGTCCTTCGC GCTCGCGGGC TGCGCGCCGA CCGCCGCCGG CTCGCCGCCG GCCGCCGAGA CGCAGGCGAC CGTCCCGCTG ACCATCCACA CCGCGCGCGG CAAGCTGGCT TATGCGGTCG AGGTCGCCTC CACCCCGCAG CAGCAGGCGC GCGGGCTGAT GTACCGCACC AGCCTGCCCG ACCATGGCGG GATGATCTTC CCGATGTCGC CGCCGCGCGA GGCGAGCTTC TGGATGAAGA ACACCTACAT CCCGCTCGAC ATGATCTTCA TCCGCGCCGA CGGCACGATC GCCCGCATCG CCGCCAACAC GGTGCCCGAG GACCTGACCC CGGTGGGATC GGGCGAGCCG GTCGCCGCCG TGCTCGAGAT CGTCGGCGGC GGCGCGGCCG CCAACGGGAT CGCCGCAGGC GATCGGGTGG AGTGGAAGAA GAAGTAG
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Protein sequence | MVAPLRLIGA FGALSFALAG CAPTAAGSPP AAETQATVPL TIHTARGKLA YAVEVASTPQ QQARGLMYRT SLPDHGGMIF PMSPPREASF WMKNTYIPLD MIFIRADGTI ARIAANTVPE DLTPVGSGEP VAAVLEIVGG GAAANGIAAG DRVEWKKK
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