Gene Swit_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2556 
Symbol 
ID5196562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2838941 
End bp2839417 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content72% 
IMG OID640582111 
Producthypothetical protein 
Protein accessionYP_001263052 
Protein GI148555470 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.601199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.165278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGC CGCTGCGGCT GATCGGCGCG TTCGGCGCCC TGTCCTTCGC GCTCGCGGGC 
TGCGCGCCGA CCGCCGCCGG CTCGCCGCCG GCCGCCGAGA CGCAGGCGAC CGTCCCGCTG
ACCATCCACA CCGCGCGCGG CAAGCTGGCT TATGCGGTCG AGGTCGCCTC CACCCCGCAG
CAGCAGGCGC GCGGGCTGAT GTACCGCACC AGCCTGCCCG ACCATGGCGG GATGATCTTC
CCGATGTCGC CGCCGCGCGA GGCGAGCTTC TGGATGAAGA ACACCTACAT CCCGCTCGAC
ATGATCTTCA TCCGCGCCGA CGGCACGATC GCCCGCATCG CCGCCAACAC GGTGCCCGAG
GACCTGACCC CGGTGGGATC GGGCGAGCCG GTCGCCGCCG TGCTCGAGAT CGTCGGCGGC
GGCGCGGCCG CCAACGGGAT CGCCGCAGGC GATCGGGTGG AGTGGAAGAA GAAGTAG
 
Protein sequence
MVAPLRLIGA FGALSFALAG CAPTAAGSPP AAETQATVPL TIHTARGKLA YAVEVASTPQ 
QQARGLMYRT SLPDHGGMIF PMSPPREASF WMKNTYIPLD MIFIRADGTI ARIAANTVPE
DLTPVGSGEP VAAVLEIVGG GAAANGIAAG DRVEWKKK