Gene Swit_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2555 
Symbol 
ID5196561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2838381 
End bp2838764 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content71% 
IMG OID640582110 
ProductNADH dehydrogenase 
Protein accessionYP_001263051 
Protein GI148555469 
COG category[C] Energy production and conversion 
COG ID[COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.645895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.166087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA AGATCTTCAC CTGGTGGGAC GGCGCCACGA TCGGCACGCT GCTGTTCAGC 
AAGCTCAACG GCACGCGGAT CGGCGAGGAT GCGCTCGGCA ACGTCTATTT CGAGGGCGGC
CGCACCACCG ACGGCCGGCC GCGCCGCTGG GTCATCTATT CCGGGTCGAA CGACGCCAGC
CGGGTTCCGG CGGAATGGCA CGGCTGGCTG CACCACAGCA CCGACCTGAC CCCCGACCAG
CTTCCGGCGC CGCGCGCCTG GCAGAAGCCG GCCGAACCGA ACCTGACCGG GACCGAGGCG
GCCTATCGGC CGGCCGGCGC GCTCGAGCGG GGCGGCGTCC GCGCCGCCGC GACCGGCGAT
TATGAGGCAT GGAGCCCGAA CTGA
 
Protein sequence
MLKKIFTWWD GATIGTLLFS KLNGTRIGED ALGNVYFEGG RTTDGRPRRW VIYSGSNDAS 
RVPAEWHGWL HHSTDLTPDQ LPAPRAWQKP AEPNLTGTEA AYRPAGALER GGVRAAATGD
YEAWSPN