Gene Swit_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2549 
Symbol 
ID5201001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2835166 
End bp2835657 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content72% 
IMG OID640582105 
Productubiquinone biosynthesis protein COQ7 
Protein accessionYP_001263046 
Protein GI148555464 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.570699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.287563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCG TCGACCAGGC CGGCGAATAT GGCGCGACGC GCATCTATGC CGGGCAGCTC 
GCGGTGATGG GCCAGCGATC GGCCGACGCC CGCGCGATCG CGCGCATGGC GGACCAGGAG
GCGCGCCATC GCGCGGTGTT CGACCGGATG ACCGCCGAGC GCGGGGTGCG GCCGACCGCG
CTGCAGCCGC TGTGGAACGT CGCGGGCTTC GCGCTGGGCG CGGCCACCGC GCTGATCGGG
CCCAAGGCGG CGATGGCCTG CACCGCCGCG ATCGAGACCG AGATCGACCG CCATTATCGC
GAGCAGATCG AGCAGATCGG CGACGGCGAT CCCGAACTGA GCGCGACGAT CGAGGAGTTC
CGCGCCGAGG AGGTCGAGCA TCGCGACGCC GCGATCGCCG CGGGCGCCGA ACAGGCCCCG
GCCTATCCGC TGCTGTCGGG CGCGATCCGG CTCGGCTGCC GCATTGCCAT CGGGCTTTCG
CGCCACATAT AA
 
Protein sequence
MLRVDQAGEY GATRIYAGQL AVMGQRSADA RAIARMADQE ARHRAVFDRM TAERGVRPTA 
LQPLWNVAGF ALGAATALIG PKAAMACTAA IETEIDRHYR EQIEQIGDGD PELSATIEEF
RAEEVEHRDA AIAAGAEQAP AYPLLSGAIR LGCRIAIGLS RHI