| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2547 |
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| Symbol | |
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| ID | 5200999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2833095 |
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| End bp | 2834444 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582103 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001263044 |
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| Protein GI | 148555462 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.524396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA CCCTGTTGCG TTCCATCGGC CTGTTCGGCG CCGGTGCCAT GATTGCCACC
CTCGCCCCCG CGATCGGCGC GGTCGACGTC GGCACCTACA AGGAACTCGA CCAGTTCATG
AGCGTGTTCG AGCGGGTCCG CTCGGACTAT GTCGACAAGG TCGACGACCG CACCCTGATC
AAGGGCGCGA TCGACGGCAT GCTCGCCAGC CTCGATCCGC ACAGCTCCTA TCTCGACGCG
CGCGACCGGC AGAACATGCG CACCCAGACG CAAGGCGCCT ATGGCGGCCT CGGCCTGTCG
GTCACGATGG AGGACGGCGC GGTCAAGATC ATGACCGCGC AGGAGGACAC CCCCGCGGCC
AAGGCCGGCC TCAAGACCGG CGACTACATC ACCCATCTCG ACGGCAAGCT GCTCTACGGC
GGCACGCTCG ACGAGGCGGT CGACCAGATG CGCGGCAAGC CCGGCACCAA GATCCTGATC
ACCGTCGTCC GCCCCGGCCG CGACAAGCCG TTCGACGTCT CGCTGACCCG CGAGCTGATC
CAGCTCAAGC CGGTCAAGTG GGAGGTCAAG GACCAGGTCG GCATCATCAA CATCAACACC
TTCGTCAACG CCAACACCGG CGATTCGGTG CGCGCGGCGA TCGCCGGCAT CCAGAAGTCG
CTGGGCCACG ACCCGCTCGG CTATGTGATC GACCTGCGCT CGAACCCCGG CGGCCTGCTC
GACCAGGCGA TCGACGTGTC CGACATCTTC CTCGACCGCG GCGAGATCGT CTCGCAGCGC
GGGCGCGAGA AGAACGACAT CGAGCGCCGC TACGCGACGG CCAGCCCGCC CGACCTGGCC
CACGGCCTGC CGATGATCGT GCTGGTCGAC GCCGGCTCCG CCTCGGCGGC GGAGATCGTC
GCGGGCGCGC TGCAGGACCA GAAGCGCGCG CTGGTGATGG GCGAGCGGAC CTTCGGCAAG
GGCTCGGTCC AGACCGTGCT CGAACTGTCC GACGACACCG CGCTCAAGCT GACCACGGCG
CGCTACTACA CGCCGTCGGG CAAGTCGGTG CAGGAGGGCG GGATCAAGCC CGACATCCTC
GTGCCGCAGC TCAGCGACCC CGACTACAAG GACCGCCCGC GCCTGCGCGA GGCCGACCTG
CGCCGCCATC TGATCAACGA GGCGAAGATC GACGACAAGG TGCTCGAGGA CGACGGCAAG
CCCGATCCGC GCTTCCAGTT CACCTCCGAG GCGCTGAAGA AGCAGGGGAT CGACGACTTC
CAGCTCGACT ATGCGGTGAA GGCGATCGCC CGCATGGCCC ACCCGCCGCT CCGCACCGCC
CTGGCCGGCG CCAAGAGCGG GGCGCGGTAA
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| Protein sequence | MTKTLLRSIG LFGAGAMIAT LAPAIGAVDV GTYKELDQFM SVFERVRSDY VDKVDDRTLI
KGAIDGMLAS LDPHSSYLDA RDRQNMRTQT QGAYGGLGLS VTMEDGAVKI MTAQEDTPAA
KAGLKTGDYI THLDGKLLYG GTLDEAVDQM RGKPGTKILI TVVRPGRDKP FDVSLTRELI
QLKPVKWEVK DQVGIININT FVNANTGDSV RAAIAGIQKS LGHDPLGYVI DLRSNPGGLL
DQAIDVSDIF LDRGEIVSQR GREKNDIERR YATASPPDLA HGLPMIVLVD AGSASAAEIV
AGALQDQKRA LVMGERTFGK GSVQTVLELS DDTALKLTTA RYYTPSGKSV QEGGIKPDIL
VPQLSDPDYK DRPRLREADL RRHLINEAKI DDKVLEDDGK PDPRFQFTSE ALKKQGIDDF
QLDYAVKAIA RMAHPPLRTA LAGAKSGAR
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