Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2547 |
Symbol | |
ID | 5200999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2833095 |
End bp | 2834444 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640582103 |
Product | carboxyl-terminal protease |
Protein accession | YP_001263044 |
Protein GI | 148555462 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.524396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGA CCCTGTTGCG TTCCATCGGC CTGTTCGGCG CCGGTGCCAT GATTGCCACC CTCGCCCCCG CGATCGGCGC GGTCGACGTC GGCACCTACA AGGAACTCGA CCAGTTCATG AGCGTGTTCG AGCGGGTCCG CTCGGACTAT GTCGACAAGG TCGACGACCG CACCCTGATC AAGGGCGCGA TCGACGGCAT GCTCGCCAGC CTCGATCCGC ACAGCTCCTA TCTCGACGCG CGCGACCGGC AGAACATGCG CACCCAGACG CAAGGCGCCT ATGGCGGCCT CGGCCTGTCG GTCACGATGG AGGACGGCGC GGTCAAGATC ATGACCGCGC AGGAGGACAC CCCCGCGGCC AAGGCCGGCC TCAAGACCGG CGACTACATC ACCCATCTCG ACGGCAAGCT GCTCTACGGC GGCACGCTCG ACGAGGCGGT CGACCAGATG CGCGGCAAGC CCGGCACCAA GATCCTGATC ACCGTCGTCC GCCCCGGCCG CGACAAGCCG TTCGACGTCT CGCTGACCCG CGAGCTGATC CAGCTCAAGC CGGTCAAGTG GGAGGTCAAG GACCAGGTCG GCATCATCAA CATCAACACC TTCGTCAACG CCAACACCGG CGATTCGGTG CGCGCGGCGA TCGCCGGCAT CCAGAAGTCG CTGGGCCACG ACCCGCTCGG CTATGTGATC GACCTGCGCT CGAACCCCGG CGGCCTGCTC GACCAGGCGA TCGACGTGTC CGACATCTTC CTCGACCGCG GCGAGATCGT CTCGCAGCGC GGGCGCGAGA AGAACGACAT CGAGCGCCGC TACGCGACGG CCAGCCCGCC CGACCTGGCC CACGGCCTGC CGATGATCGT GCTGGTCGAC GCCGGCTCCG CCTCGGCGGC GGAGATCGTC GCGGGCGCGC TGCAGGACCA GAAGCGCGCG CTGGTGATGG GCGAGCGGAC CTTCGGCAAG GGCTCGGTCC AGACCGTGCT CGAACTGTCC GACGACACCG CGCTCAAGCT GACCACGGCG CGCTACTACA CGCCGTCGGG CAAGTCGGTG CAGGAGGGCG GGATCAAGCC CGACATCCTC GTGCCGCAGC TCAGCGACCC CGACTACAAG GACCGCCCGC GCCTGCGCGA GGCCGACCTG CGCCGCCATC TGATCAACGA GGCGAAGATC GACGACAAGG TGCTCGAGGA CGACGGCAAG CCCGATCCGC GCTTCCAGTT CACCTCCGAG GCGCTGAAGA AGCAGGGGAT CGACGACTTC CAGCTCGACT ATGCGGTGAA GGCGATCGCC CGCATGGCCC ACCCGCCGCT CCGCACCGCC CTGGCCGGCG CCAAGAGCGG GGCGCGGTAA
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Protein sequence | MTKTLLRSIG LFGAGAMIAT LAPAIGAVDV GTYKELDQFM SVFERVRSDY VDKVDDRTLI KGAIDGMLAS LDPHSSYLDA RDRQNMRTQT QGAYGGLGLS VTMEDGAVKI MTAQEDTPAA KAGLKTGDYI THLDGKLLYG GTLDEAVDQM RGKPGTKILI TVVRPGRDKP FDVSLTRELI QLKPVKWEVK DQVGIININT FVNANTGDSV RAAIAGIQKS LGHDPLGYVI DLRSNPGGLL DQAIDVSDIF LDRGEIVSQR GREKNDIERR YATASPPDLA HGLPMIVLVD AGSASAAEIV AGALQDQKRA LVMGERTFGK GSVQTVLELS DDTALKLTTA RYYTPSGKSV QEGGIKPDIL VPQLSDPDYK DRPRLREADL RRHLINEAKI DDKVLEDDGK PDPRFQFTSE ALKKQGIDDF QLDYAVKAIA RMAHPPLRTA LAGAKSGAR
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