| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2522 |
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| Symbol | |
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| ID | 5197102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2802005 |
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| End bp | 2804107 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582070 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263019 |
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| Protein GI | 148555437 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.644124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGG GGCTGCTCAT CGGCGTGGCG GCGGCGGGAT TCGCGGGCGT CATGGCGACC
GCGCCGGCGG CGGCGCAGGT CGTCGCCAGC GATCAGGACG AACTGATCGT CACCGCGCGC
AAGCAATCGG AGAATATCCG GGACGTGCCC GACACGATCC AGGCCTTCTC CGCGACGACG
CTCGAACGGG CGGGCATCGA ATCGGTCAAC GACCTGACCC AGATGGTGTC GGGCTTCCGC
ATCGTCGAGG CGCAGCAGCC CGGCGTCGTG CTGATCAACA TCCGCGGCAT CGGCCAGGTG
CGCAACGGCG AATCGCCGGT CGCGGTGGTC GTCGACGGGG TGCAGCAGAA CTCGCCGAAC
CAGATCACCC AGGACCTGTT CGACGTCGAG CGGATCGAGA TCCTCAAGGG GCCGCAGGGC
GCGCTCTATG GCCGCAACGC GATCGGCGGC GCGATCAACA TCGTCACCAA GGAGCCGGGC
GACAGCTTCG GCGGCAGCGC CGAGCTCGGC TATGCCGAGG GCGACGAGTT CCGCGCCAAG
GCCTCGATCA CCGCGCCGCT GGGCGAGAAG GCGGGCTTCC GCCTGGCGGG CAGCTATCTG
AACCGCGACG GCCAGATCAC CAATTCGACG CTCAACAAGA AGGTCGACTT CGACGAGACC
TGGGCGGTGC GCGGCGCGCT GCTGCTCAAG CCGACCGAGA CGCTGAAGAT CGACCTGCGC
GGCAGCTATT ACGACCAGGA TGCCGGCGCC TCCTGGTATG TCGGCGGCCC GGCGAACAGC
CCGCGGGTGC CGGTGGTCGG CAACATCCTC GGCAAGGCGG GACGCAAGCT GGGCGACGTC
TCGGCGAAGA TCGACTTCGA CCTGGGCTCG GTCGCGCTGA CCTCGGTCAC TGCCTGGTCG
TCGGTCAAGT CGGACCTGTT CGAGGAGCTC GACTGGGAGC CGCAGGACCT CGCCGCCGCC
ACCCAGACGC TCGACGTCAA GGCGTGGAGC GAGGAGCTGC GGCTGTCGTC GAACACCCCC
GGATCGGCGC TGCGCTGGAT GACCGGGCTC TATTATCTCC ACACCGACCG CACCCTGAAC
ACCGCGATCT TCCTCGGCCC CGACCTGACC GGCCTGCCGA GCCGGGTGCT CGGCTCGCGG
CTGATCGCGA AGGACGACAA CGACGCCTAT GCGGCGTTCG GCCAGGTCAA CTACGACATC
GTCGAGCATC TCGAGCTGAC CGCCGCGCTG CGCTACGACA TCGACCGGCG CCGCCAGGAC
GACGTCTCGC CGCCGGTGCC CGCCGTCGTC CCGCGCTACA AGGGGACGTA CAAGTCGCTC
CAGCCCAAGC TGTCGCTGGC CTACAGCTTC CCCGGCGGGT CGCTCGCCTA TGCGACCGTC
GCCAAGGGCT TCCGCAGCGG CGGCTTCAAC TCGAACGCGG TGGTCACGCG CGAGTTCAAG
AAGGAGGAGC TGTGGAACTA TGAGCTCGGC TTCAAGACCG CGCTCGCCGA CCGCAAGCTC
TACCTGAACG GCGCCATCTT CTACAGCGAC ATCACCGACC GGCAGGTGTT CGGCCTCGAC
CTCAGCACCG GCCCGGCGCA GTTCATCGCC AACCCGATCC CCAAGTCGAG CGTCTGGGGC
GCCGAGCTGG AGATGACGGC GCGCCCGGTC AAGGGGCTGG AGCTGTCGAT GGGCGCCAGC
CTGATGGACA CGAAGATCAA CACATATGAC GTGACGGTCT TCTCGGGCAC CGCCGCGCGC
GGCGACTTCA AGGGCAACAA GCTCAACCAG GTGCCGCGCT ACACGCTCAA CGCGGCGGCG
CAATACACCG CCGATCTGGG CGGCAGCAGC CTGATCTCGC GCGTCGACGT CTCCGGCTGG
GGCGGCGACT ATTATTGGGA GATCGACAAC GCCCAGAAGC AGAAGCCGGT CTGGCTGGTC
AATGCGCGGC TGACCTGGGC GGTCGGCAAG GTCGAGCTGA CCGGCTTCGT CAAGAACCTG
TTCGACCGGC GCTACGACGT CGAGTTCGTG CCGGTCAATT TCGGCGGCAC GATCACCGGC
AAGGACCTGG GCTCGGCGTC GCCGCCCCGC CAGATCGGCG GCAGCGCCAA GGTGCGTTTC
TGA
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| Protein sequence | MKRGLLIGVA AAGFAGVMAT APAAAQVVAS DQDELIVTAR KQSENIRDVP DTIQAFSATT
LERAGIESVN DLTQMVSGFR IVEAQQPGVV LINIRGIGQV RNGESPVAVV VDGVQQNSPN
QITQDLFDVE RIEILKGPQG ALYGRNAIGG AINIVTKEPG DSFGGSAELG YAEGDEFRAK
ASITAPLGEK AGFRLAGSYL NRDGQITNST LNKKVDFDET WAVRGALLLK PTETLKIDLR
GSYYDQDAGA SWYVGGPANS PRVPVVGNIL GKAGRKLGDV SAKIDFDLGS VALTSVTAWS
SVKSDLFEEL DWEPQDLAAA TQTLDVKAWS EELRLSSNTP GSALRWMTGL YYLHTDRTLN
TAIFLGPDLT GLPSRVLGSR LIAKDDNDAY AAFGQVNYDI VEHLELTAAL RYDIDRRRQD
DVSPPVPAVV PRYKGTYKSL QPKLSLAYSF PGGSLAYATV AKGFRSGGFN SNAVVTREFK
KEELWNYELG FKTALADRKL YLNGAIFYSD ITDRQVFGLD LSTGPAQFIA NPIPKSSVWG
AELEMTARPV KGLELSMGAS LMDTKINTYD VTVFSGTAAR GDFKGNKLNQ VPRYTLNAAA
QYTADLGGSS LISRVDVSGW GGDYYWEIDN AQKQKPVWLV NARLTWAVGK VELTGFVKNL
FDRRYDVEFV PVNFGGTITG KDLGSASPPR QIGGSAKVRF
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