| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2516 |
|---|
| Symbol | |
|---|
| ID | 5198192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2792968 |
|---|
| End bp | 2795328 |
|---|
| Gene Length | 2361 bp |
|---|
| Protein Length | 786 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640582064 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001263013 |
|---|
| Protein GI | 148555431 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.424858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAC CGGGGCGGTC GATGCGGGCA GTGATGCGCA TGCTGGCGGG CGGATCGCTG
CTCGCGGCGA ACCTGGCCTT CGCCGCCGCG CCGCCGCCCG TCGCGGGCGA TGCCGCGCGC
CCCGTCGCCG ATCCGCCGGG CGCGCAGCAT TTCGCCGGGA TCACGCCCGC CACCTCCTCG
GCGCCGTCCT GGCCGGAACA GCCCCGCGCT CCGAAGGGCG CGCCCAACGT CCTGCTGATC
CTGACCGACG ACATCGGCTT CGGCGCGACC AGCACCTTCG GCGGCCCGGT CCCCACCCCG
ACCTTCGACG CGCTGGCGAA GGAGGGGCTG CGCTACACCC AGTTCAACAC CACCGCGATC
TGCTCGCCGA CCCGCGCGGC GCTGCTCACC GGGCGCAACC CGCACGCGGT GGGGATGGGC
CATGTCGAGA ACACCTCGGC CGGCTACGAA GGCTATGATT CGGTCATCCC CAAATCCTCG
GCCTTCATCT CGCGGATCCT GCGCCAGGGC GGCTACGCCA CCGCCGCCTT CGGCAAATGG
CACCTGACCC CGCAATGGGA GCAGAGCCAG GCCGGCCCCT ATGATCGCTG GCCGCTGGGC
CAGGGCTTCG AGAATTTCTA CGGCTTCCTC GCGTCCGACA ACAGCCAGTG GAACCCCACG
CTGACGCAGG ACAACAGCTT CATCGACGTG GCGACGCCGC CCGGCTATCA TTTCGACGCC
GACATGGCCG ACCATGCGAT CCGCTGGATC GCCGAGCGCA AGGCCAACGC GCCCGACAAG
CCCTTCTTCG CCTATTATGC GCCGGGCACC GCGCACACGC CCAGCCACGC GCCCAGGGAA
TGGCTCGACC GCTTCAAGGG CCGTTTCGAC AAGGGCTGGG ACGCGCTGCG CGAGGAGATC
TTCGCGCGGC AGAAGGCGCT GGGCGTGATC CCCGCCGGCA CCGTGCTGAC CGCGCGCCCG
AAGGAGCTGC CCGCCTGGAG CTCGCTCTCC GCCGACCAGC GCCGCCTCTA TGCGCGCTAC
ATGGAGGCCT GGGCGGCGTC GATCGCCTAT ATGGATTCGC AGATCGGCCG GGTGATCCAG
TCGCTCAAGG ACAGCGGCCA ATATGACAAC ACGCTGATCA TCTACATCCA GGGCGACAAC
GGATCGAGCG CGGAGGGCGG CATGGACGGG CTGCTGTTCC AGCAGTCGCT GCTCAACAAC
CATGCCGAGC AGCGCGCCTA CGCGCTCAGC CGGATCGACG ACATCGGCGG GCCCGACCTC
TATCCGCTCT TTCCCGCCGG CTGGGGCTGG GCGACCGCCG CGCCGTTCAA ATATTACAAG
CAGATCGCCT CCTATTTCGG CGGCACCCGC AACGGCATGG TGATGAGCTG GCCGAAGGGG
ATCGCCGACA AGGGCGGCAT CCGCGGCCAA TATCATTTCG TCACCGACAT CATGCCGACC
ATCCTGGAGG CGACCGGCGT CGCCCGGCCC GCGTCGGTCG ACGGGGTCGA GCAGCGTCCG
CTCGACGGGG TGAGCATGGC GTACAGCTTC ACCGCCCCCG ACGCGCCGTC GCACCGGCGG
ATGCAGGTGT ACGAGATGGT CGATTCGCGC GGCATCTATC TCGACGGCTG GTTCGCCTCG
ATGCGGCCGA CCCGGCAGCC CTGGACCTTC GACAAGCCCG CCGATCCCGA CAAGACGCCG
TGGGAGCTGT ACGACGTCCG CGCCGATTTC AGCCAGGCGC ACGACCTGGC GGCGCGCTAT
CCCGATCGGC TGCGGACGAT GCAGCAGCTC TTCTGGGCGG AGGCCGGACG CAACCACATC
CTGCCGATCC TCGAGCCGAC GATCCTGCCC ACCGGCCGCC CCTCGCTCGG CGCCGGCCGC
ACCGGCTTCC GCTATCCGCA GGGGATCACC CGCATCCCCG AGGACAGCGC GCCGCACATC
ATCGGCCGTT CCTACAGCGT GTCGACGACG ATCGACGTGG CGGGCGCGCC GAACGGCGTC
CTCGTCGCGC AGGGCGGCCG CTTCGGCGGC TGGGCGCTCT ACTTCCGCGA CGGGCGGCTG
ACCTACCACC AGAACGCGCT CGACCCGCGC CAGTATCGCG TCGTCAGCGA TCGCGCGATC
GGGCCCGGGC GGCACAGCGT CGAAATGCTG TTCGAGGCCG ACAGCCATGC CCGCGGCGCG
GGCGGCACGG TCAGCTTCAC GATCGACGGC CAGCCGGCGG GACAGGGCCA TGTGCCGCTG
ACCCTCGGCG GGTGGATCTC GCACATCGAG GGGCTCGACG TCGGCGTCGA CACCGGCACG
CCGGTCTCCG ACGAGTACCG ATCGCATGAC AGCGCGTTCA ACGGCCGGTT CGATGCACTG
GAGATGAAAC TGATCGATTG A
|
|---|
| Protein sequence | MARPGRSMRA VMRMLAGGSL LAANLAFAAA PPPVAGDAAR PVADPPGAQH FAGITPATSS
APSWPEQPRA PKGAPNVLLI LTDDIGFGAT STFGGPVPTP TFDALAKEGL RYTQFNTTAI
CSPTRAALLT GRNPHAVGMG HVENTSAGYE GYDSVIPKSS AFISRILRQG GYATAAFGKW
HLTPQWEQSQ AGPYDRWPLG QGFENFYGFL ASDNSQWNPT LTQDNSFIDV ATPPGYHFDA
DMADHAIRWI AERKANAPDK PFFAYYAPGT AHTPSHAPRE WLDRFKGRFD KGWDALREEI
FARQKALGVI PAGTVLTARP KELPAWSSLS ADQRRLYARY MEAWAASIAY MDSQIGRVIQ
SLKDSGQYDN TLIIYIQGDN GSSAEGGMDG LLFQQSLLNN HAEQRAYALS RIDDIGGPDL
YPLFPAGWGW ATAAPFKYYK QIASYFGGTR NGMVMSWPKG IADKGGIRGQ YHFVTDIMPT
ILEATGVARP ASVDGVEQRP LDGVSMAYSF TAPDAPSHRR MQVYEMVDSR GIYLDGWFAS
MRPTRQPWTF DKPADPDKTP WELYDVRADF SQAHDLAARY PDRLRTMQQL FWAEAGRNHI
LPILEPTILP TGRPSLGAGR TGFRYPQGIT RIPEDSAPHI IGRSYSVSTT IDVAGAPNGV
LVAQGGRFGG WALYFRDGRL TYHQNALDPR QYRVVSDRAI GPGRHSVEML FEADSHARGA
GGTVSFTIDG QPAGQGHVPL TLGGWISHIE GLDVGVDTGT PVSDEYRSHD SAFNGRFDAL
EMKLID
|
|---|
| |