| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2508 |
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| Symbol | |
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| ID | 5199907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2784779 |
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| End bp | 2785735 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582056 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001263005 |
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| Protein GI | 148555423 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCAGG TAGCGCTCGC CCTCGCCGCC CTGCTGGCGC TCGCGGCCTG CGGCCGGGGC
GCCGGCGACG ACACGACCGT GCTCCACGTC GGCAGCCAGC GCGGCGGCAC CAAGGCGGTG
CTGCTCGCCA GCGGCGCGCT GGAAGGCGCG CCCTACCGGG TCGAATGGTC CGAATTCCCG
GCGGCCCAGC ACCTGCTGGA GGCGATCGGC GGCGGCGCGG TCGACGTCGG GGTGGTCGGC
GACGCGCCTT TCATCTTCGC CTATCAGAGC GGCAGCCGGA TCAAGGCGGT GGGCGCGCAG
TTCGTCGATG AACGGCCGGT CGGCGCGCTC GCGCTGGTCG TGCCGAAGGG GTCGCCCGTC
CGCTCGCTCG CCGACCTGAA AGGGCGCAAG ATCGCGACGA CGCGCGGCTC GGTCGGCCAT
TATCTGGTGA TCCGGGCGCT ACAGCAGGCG AAGCTGCCGC CCGACTGGGT GAGCTTCGTC
TTCCTGTCGC CGGGCGACGC CAAGGCCGCG TTCAGCTCGG GCGCGATCGA CGGCTGGGCG
ACCTGGGCGC CCTATCTGCT CCCCGCCTTC AAGGAGGGGG CCCGCACGAT CGCCGACGGG
CACGACCTGG TGAAGGGCTA TGGCTTCGAC GTCGCCAATG AGGCGGCGAT CCGCGCCAAG
CCGGCGATCC TCGCCGATTT CCTCAAGCGC GAGGCGAAGG CGCTCGCCTG GGCGCGGGCG
AATCCCGGCC CCTATGGCGT GGTGCTCGCC CGCGAGACCG GCCTGCCGAT CGAGATCGCG
CGCGATTACG CGCTCAAGAA CGCGCGCACC CTGGTGCCGA TCGACGATGC GCTGATCGCG
GAGCAGCGGC AGGTGCTCGA CGATTTCCAG ACGGCCGGCG CCGTCAAGGG CGACCGCGCC
CTGGCCGACG GGTTCGACCG GTCATTCTTC ACCGGGAAGG TCGCGGCAGC GAACTAG
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| Protein sequence | MKQVALALAA LLALAACGRG AGDDTTVLHV GSQRGGTKAV LLASGALEGA PYRVEWSEFP
AAQHLLEAIG GGAVDVGVVG DAPFIFAYQS GSRIKAVGAQ FVDERPVGAL ALVVPKGSPV
RSLADLKGRK IATTRGSVGH YLVIRALQQA KLPPDWVSFV FLSPGDAKAA FSSGAIDGWA
TWAPYLLPAF KEGARTIADG HDLVKGYGFD VANEAAIRAK PAILADFLKR EAKALAWARA
NPGPYGVVLA RETGLPIEIA RDYALKNART LVPIDDALIA EQRQVLDDFQ TAGAVKGDRA
LADGFDRSFF TGKVAAAN
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