| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2506 |
|---|
| Symbol | |
|---|
| ID | 5198202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2780756 |
|---|
| End bp | 2782144 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640582054 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263003 |
|---|
| Protein GI | 148555421 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATA AGGGCGCGCC GCCGCGCATA GGGCATGTCG CGATCATCGG CGCGGGGTTC
TCGGGCAGCT TGCAGGCGAT CAACCTGCTG CGGCACGACG GGCCCCGCGT CACACTGATA
GAACGGCGCG GCAGCTTCGC GCGGGGCGTC GCCTATTCGA CGCCCGACGA GGCCCATCTC
CTCAACGTCC GGGCGGCGAA CATGAGCGCG CTGCCCGACG ATCCCGACCA TTTCGTCCGC
TGGCTCGCCG CCGCCGGCAA GGGGCGGCCG CAGAGCTTCG CGTCGCGCCG CGACTATGGC
CGCTATCTGG GCGAGCTGCT CCAGGCGACG ATGCGCGCCG CGCCGGGGCG GCTGGCGCTG
CGGCGCGACG ACGCGATCGA ACTGGCGGTG CGCGACGACG GCGTCACCGT CGGTTTCGCC
GGCGGGGAGC GGCTGGCCGC CGACGCGGCG GTGCTCGCGC TCGGCAACCT GCCGCCGCAC
GATCCGCCCG GCTTCGCCGT CGCGGCGCTG CCGGCCGATC TCTATGTCGC CGATCCCTGG
GCTGGTCCCG AAGCGGGCGC GCTGGCGTCG GGGCTGGACG CGGAGGATAG CGTCCTCGTC
GTCGGCACCG GGCTGACCAT GGTCGACGTC GTGCTGAGCC TGGAGGCGCA GGGGTTTCGC
GGGCGGATCG TCGCCATCTC GCGGCGCGGA CTGACGCCAC GCGTCCATGG CGACGGCGCG
ATGCCGTCCT CGGCGCTGGC GGAGAAGCCG GCGATGCACG GATCGGCGCT GGTCCGCTTC
GTGCGCGAGC GCGCTCGCGC AGTCGGCTGG CGGGCCGCCG TCGACGAACT GCGCCCTTAC
ACCCAGGCGA TGTGGTTGTC CGCGCCGCTC GCCGAGCAGA CCCGCTTCCT GCGCCATCTG
CGGCCCTGGT GGGATGTCCA TCGCCATAGG CTCGCCCCCG AGGTCGCCGC GCGGCTCGAC
GCGCTCCGCG CCGCCGGCCG CCTCCGCGCG GTCGCCGGGA AGATCGATGC GGTCGAGGCC
CGCGACGGCC ACCTCGCCGT CGTCTGGCGG CCCCGCCATG GCGGCGCGGC GGAGCCGCTC
GTCGTGCGGC GCGCGATCAA CTGTACCGGG CCGCAGGGCG ACCTGCTGCG CACCCGCGAG
CCGCTGCTGC GCGGGCTGCT GGCGGCGGGG CAGGTCCGCC CCGATCCGCA CCGCTTCGGC
ATCGACGTCA CCGCGCAGGC CGAGACGATC GACGCGGAAG GGCGGGCCCA TCCGCGCCTG
CTCGCGCTCG GCCCGATCAC GCGCGGCGCC TTCTGGGAGA TCGTCGCCGT CCCCGATATC
CGGGTCCAGA GCTGGTCCGT CGCCCGCCGC CTGAGCCACG CCCATTGGGT CGAGGGCGAG
GGCCTCTGA
|
|---|
| Protein sequence | MTDKGAPPRI GHVAIIGAGF SGSLQAINLL RHDGPRVTLI ERRGSFARGV AYSTPDEAHL
LNVRAANMSA LPDDPDHFVR WLAAAGKGRP QSFASRRDYG RYLGELLQAT MRAAPGRLAL
RRDDAIELAV RDDGVTVGFA GGERLAADAA VLALGNLPPH DPPGFAVAAL PADLYVADPW
AGPEAGALAS GLDAEDSVLV VGTGLTMVDV VLSLEAQGFR GRIVAISRRG LTPRVHGDGA
MPSSALAEKP AMHGSALVRF VRERARAVGW RAAVDELRPY TQAMWLSAPL AEQTRFLRHL
RPWWDVHRHR LAPEVAARLD ALRAAGRLRA VAGKIDAVEA RDGHLAVVWR PRHGGAAEPL
VVRRAINCTG PQGDLLRTRE PLLRGLLAAG QVRPDPHRFG IDVTAQAETI DAEGRAHPRL
LALGPITRGA FWEIVAVPDI RVQSWSVARR LSHAHWVEGE GL
|
|---|
| |