Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2474 |
Symbol | |
ID | 5199928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2747289 |
End bp | 2749769 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640582022 |
Product | hypothetical protein |
Protein accession | YP_001262971 |
Protein GI | 148555389 |
COG category | [R] General function prediction only |
COG ID | [COG3211] Predicted phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.552746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACG TGGTTCGTGA CGGCTATTCG GATGGTGTCG TCGACTGCAA TCCGACCGAC AATCCGACGC TGGAAAGCAT CGCCGCCGAG CGCTATTCGC GCCGCCAGAC GCTGTTCGGC GGCATTTCGG CGATCGCCGC CGCCAGCTTC GGCGGGCTGC TGCTGACCGC CTGCGGCAGC GACAACGACG CGCCCGTCGT CAACGCCGGC GCCAACGGCC AGTCGAGCTC GGGCAAGCTG GTGACGCTGG CCGGCACCGC CACCGACAAG GATGCGCTGA CCCTGTCCTG GACCCAGGTC TCGGGCCCGA CCGTCACGCT GAGCAATGCC AACACCAACA CTGCGACCTT CATCGCGCCG GCGGTGTCTG CGGCGACCCC GCTGGTGTTC GAGTTCAAGG CGACCGACGA CCGCAACAAG TCGACCACGG CGCAGACCAC CGTCACCGTC TCCCCCGCGG TGCTCGGCTT CACCGCCGTG GCCAAGAGCC TCGACGACGT CGTCAAGGTG CCCGAGGGCT ATGCCGTCTC GGTCCTCTAT CGCCTCGGCG ATCCGCTCAA CGCGGCGACC TCGGCCTATG CCAACAACGG CACCGACACC GGCTTCTCGG CGCGCGGCGG CGACCATCAT GACGGCATGC ATTATTTCGG CCTCGCCGCG ACCGGATCGA CCCGCGACGA CGCCAGCAAC ACACGCGGCC TGCTGGTGAT GAACCATGAG AACATCACCC AGGTCTATCT GCACGCCAAC GGCCCCACCT CGACCGGCGG CGTCCGCCCC GAGGGCGAGG CGCTCAAGGA GATGGAGGCG CACGGCGTCG CCGTCGTCGA GGTCGGCCGC GCCGGCTCGG GCGCCTGGAG CTATGTCCAG GGCAGCGCGC TCAACCGCCG CGTCACCCCG CTGACGCCCA CCCTGTTCAG CGGTCCGGCG CGCGGCAACG CGCTGCTCCG CACCCGCTTC TCGGCCGCCG GCACCGACGG TCGCGGCACG ATCAACAATT GCGCCAACGG CTTCACCGCC TGGGGCAGCT ACCTGACCTG CGAGGAGAAT TGGGCGGGCT ATTTCCGTCG CGCGACGGGC GACGATGCCG CGCGCGGCGG CGCCACCGCC AGGTCGGTGG TCGCGCTCAA GCGCTACGGC ATCCCCGAAG GCGCCGGCGG CAGCTATGGC TGGGCCTCGG TCGTCCCCGC CGATGCGGCG AGCACCGTCT ATGCGCGCTG GGACGCGAGC GCGAGCGGCG CTGCCGCCGA CGGCACCGCC GACTTCCGCA ACGAACCGAA CCAGTTCGGC TGGGTGGTCG AGATCGATCC CTATGACCCG ACCAAGGCGC CCCGCAAGCG CACCGCGCTC GGCCGCTTCG GCCATGAGGG CTGCTGGCCG TCGGCGTTCG TCGCGGGCCG CAAGCCGGCC TTCTACATGG GCGACGATTC GCGCGGCGAA TATCTCTACA AGTTCGTCTC GGCCCAGCCC TGGGTGGCGG CGGACGCCGG CGCGACCGAC CGGCTCGCGA TCGGCGACAA ATATTTCGAC GCCGGCACCC TCTATGTCGC GAAGTTCAAC GCCGACGGCA GCGGCACCTG GATGCCGTTG TTGTTCGGCA CCGGCCCGCT GACCGCCGCC AACGCCGCCT ACGCCTTCGC CGATCAGGCC GACGTGCTGA CCAACGCCCG GCTCGCGGCC GACGCGCTGG GCGCGACCAA GATGGACCGT CCGGAATGGA CCGCGATCAA CCCGGCGACC GGCGAGATGT ATCTGACGCT CACCAACAAC AGCGCCTCGG TCCGTCCGCT CGACGGCACC GACGCGGCGA ACCCGCGCCA TTACAATGAT CCGAAGGGCA GCGCGAACAC CGCGCAGCGA GGCAATCCCA ACGGCCATAT CGTTCGGCTG CGTGAGGCCG GCGACACGTC GGAAGCGACG AGCTTCGGCT GGGACATCTA TCTGTTCGGC GCCGACTCGG CCGATTCGGA CCCGGCCAAC GTCAACCTGT CGGGCCTCGA CGCGAGCAAC GACTTCTCGA GCCCCGACGG CCTGTGGTTC GGCCGGCCGA GCAACGAATC GGGCCAGGTC AGCCCGCTGC TGTGGATCCA GACCGACGAC GGCGCCTTTA CCGATCGCAC CAACAACCAG ATGCTGGTCG CGCTTCCGGG CAAGGTCGGC GACGGCGGCG CGAAGACGAT CACCAACACC GGCGCCGACG GCAGCACCCG CACCCAGGCG ACGATCGTCG GCAAGGCGGC GACCGGCGCG ACGCTGAAGC GCTTCCTGGT CGGTCCGAAG GGCTGCGAGA TCACCGGCAT CGACACGACG CCCGACGGCC GCACCCTGTT CGTCAACATC CAGCATCCCG GCGAAGAGGG TGGCCTGGCC ACCTTGCAGA GCAGCTGGCC CGCGACCCAG GGCGGCACCA GCTCGACCGC GCGCCCGCGC TCGGCGACGA TCGTGATCAC CAGGAACGAC GGCGGCGTCG TCGGCCTCTG A
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Protein sequence | MTDVVRDGYS DGVVDCNPTD NPTLESIAAE RYSRRQTLFG GISAIAAASF GGLLLTACGS DNDAPVVNAG ANGQSSSGKL VTLAGTATDK DALTLSWTQV SGPTVTLSNA NTNTATFIAP AVSAATPLVF EFKATDDRNK STTAQTTVTV SPAVLGFTAV AKSLDDVVKV PEGYAVSVLY RLGDPLNAAT SAYANNGTDT GFSARGGDHH DGMHYFGLAA TGSTRDDASN TRGLLVMNHE NITQVYLHAN GPTSTGGVRP EGEALKEMEA HGVAVVEVGR AGSGAWSYVQ GSALNRRVTP LTPTLFSGPA RGNALLRTRF SAAGTDGRGT INNCANGFTA WGSYLTCEEN WAGYFRRATG DDAARGGATA RSVVALKRYG IPEGAGGSYG WASVVPADAA STVYARWDAS ASGAAADGTA DFRNEPNQFG WVVEIDPYDP TKAPRKRTAL GRFGHEGCWP SAFVAGRKPA FYMGDDSRGE YLYKFVSAQP WVAADAGATD RLAIGDKYFD AGTLYVAKFN ADGSGTWMPL LFGTGPLTAA NAAYAFADQA DVLTNARLAA DALGATKMDR PEWTAINPAT GEMYLTLTNN SASVRPLDGT DAANPRHYND PKGSANTAQR GNPNGHIVRL REAGDTSEAT SFGWDIYLFG ADSADSDPAN VNLSGLDASN DFSSPDGLWF GRPSNESGQV SPLLWIQTDD GAFTDRTNNQ MLVALPGKVG DGGAKTITNT GADGSTRTQA TIVGKAATGA TLKRFLVGPK GCEITGIDTT PDGRTLFVNI QHPGEEGGLA TLQSSWPATQ GGTSSTARPR SATIVITRND GGVVGL
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