Gene Swit_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2474 
Symbol 
ID5199928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2747289 
End bp2749769 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content70% 
IMG OID640582022 
Producthypothetical protein 
Protein accessionYP_001262971 
Protein GI148555389 
COG category[R] General function prediction only 
COG ID[COG3211] Predicted phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.552746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG TGGTTCGTGA CGGCTATTCG GATGGTGTCG TCGACTGCAA TCCGACCGAC 
AATCCGACGC TGGAAAGCAT CGCCGCCGAG CGCTATTCGC GCCGCCAGAC GCTGTTCGGC
GGCATTTCGG CGATCGCCGC CGCCAGCTTC GGCGGGCTGC TGCTGACCGC CTGCGGCAGC
GACAACGACG CGCCCGTCGT CAACGCCGGC GCCAACGGCC AGTCGAGCTC GGGCAAGCTG
GTGACGCTGG CCGGCACCGC CACCGACAAG GATGCGCTGA CCCTGTCCTG GACCCAGGTC
TCGGGCCCGA CCGTCACGCT GAGCAATGCC AACACCAACA CTGCGACCTT CATCGCGCCG
GCGGTGTCTG CGGCGACCCC GCTGGTGTTC GAGTTCAAGG CGACCGACGA CCGCAACAAG
TCGACCACGG CGCAGACCAC CGTCACCGTC TCCCCCGCGG TGCTCGGCTT CACCGCCGTG
GCCAAGAGCC TCGACGACGT CGTCAAGGTG CCCGAGGGCT ATGCCGTCTC GGTCCTCTAT
CGCCTCGGCG ATCCGCTCAA CGCGGCGACC TCGGCCTATG CCAACAACGG CACCGACACC
GGCTTCTCGG CGCGCGGCGG CGACCATCAT GACGGCATGC ATTATTTCGG CCTCGCCGCG
ACCGGATCGA CCCGCGACGA CGCCAGCAAC ACACGCGGCC TGCTGGTGAT GAACCATGAG
AACATCACCC AGGTCTATCT GCACGCCAAC GGCCCCACCT CGACCGGCGG CGTCCGCCCC
GAGGGCGAGG CGCTCAAGGA GATGGAGGCG CACGGCGTCG CCGTCGTCGA GGTCGGCCGC
GCCGGCTCGG GCGCCTGGAG CTATGTCCAG GGCAGCGCGC TCAACCGCCG CGTCACCCCG
CTGACGCCCA CCCTGTTCAG CGGTCCGGCG CGCGGCAACG CGCTGCTCCG CACCCGCTTC
TCGGCCGCCG GCACCGACGG TCGCGGCACG ATCAACAATT GCGCCAACGG CTTCACCGCC
TGGGGCAGCT ACCTGACCTG CGAGGAGAAT TGGGCGGGCT ATTTCCGTCG CGCGACGGGC
GACGATGCCG CGCGCGGCGG CGCCACCGCC AGGTCGGTGG TCGCGCTCAA GCGCTACGGC
ATCCCCGAAG GCGCCGGCGG CAGCTATGGC TGGGCCTCGG TCGTCCCCGC CGATGCGGCG
AGCACCGTCT ATGCGCGCTG GGACGCGAGC GCGAGCGGCG CTGCCGCCGA CGGCACCGCC
GACTTCCGCA ACGAACCGAA CCAGTTCGGC TGGGTGGTCG AGATCGATCC CTATGACCCG
ACCAAGGCGC CCCGCAAGCG CACCGCGCTC GGCCGCTTCG GCCATGAGGG CTGCTGGCCG
TCGGCGTTCG TCGCGGGCCG CAAGCCGGCC TTCTACATGG GCGACGATTC GCGCGGCGAA
TATCTCTACA AGTTCGTCTC GGCCCAGCCC TGGGTGGCGG CGGACGCCGG CGCGACCGAC
CGGCTCGCGA TCGGCGACAA ATATTTCGAC GCCGGCACCC TCTATGTCGC GAAGTTCAAC
GCCGACGGCA GCGGCACCTG GATGCCGTTG TTGTTCGGCA CCGGCCCGCT GACCGCCGCC
AACGCCGCCT ACGCCTTCGC CGATCAGGCC GACGTGCTGA CCAACGCCCG GCTCGCGGCC
GACGCGCTGG GCGCGACCAA GATGGACCGT CCGGAATGGA CCGCGATCAA CCCGGCGACC
GGCGAGATGT ATCTGACGCT CACCAACAAC AGCGCCTCGG TCCGTCCGCT CGACGGCACC
GACGCGGCGA ACCCGCGCCA TTACAATGAT CCGAAGGGCA GCGCGAACAC CGCGCAGCGA
GGCAATCCCA ACGGCCATAT CGTTCGGCTG CGTGAGGCCG GCGACACGTC GGAAGCGACG
AGCTTCGGCT GGGACATCTA TCTGTTCGGC GCCGACTCGG CCGATTCGGA CCCGGCCAAC
GTCAACCTGT CGGGCCTCGA CGCGAGCAAC GACTTCTCGA GCCCCGACGG CCTGTGGTTC
GGCCGGCCGA GCAACGAATC GGGCCAGGTC AGCCCGCTGC TGTGGATCCA GACCGACGAC
GGCGCCTTTA CCGATCGCAC CAACAACCAG ATGCTGGTCG CGCTTCCGGG CAAGGTCGGC
GACGGCGGCG CGAAGACGAT CACCAACACC GGCGCCGACG GCAGCACCCG CACCCAGGCG
ACGATCGTCG GCAAGGCGGC GACCGGCGCG ACGCTGAAGC GCTTCCTGGT CGGTCCGAAG
GGCTGCGAGA TCACCGGCAT CGACACGACG CCCGACGGCC GCACCCTGTT CGTCAACATC
CAGCATCCCG GCGAAGAGGG TGGCCTGGCC ACCTTGCAGA GCAGCTGGCC CGCGACCCAG
GGCGGCACCA GCTCGACCGC GCGCCCGCGC TCGGCGACGA TCGTGATCAC CAGGAACGAC
GGCGGCGTCG TCGGCCTCTG A
 
Protein sequence
MTDVVRDGYS DGVVDCNPTD NPTLESIAAE RYSRRQTLFG GISAIAAASF GGLLLTACGS 
DNDAPVVNAG ANGQSSSGKL VTLAGTATDK DALTLSWTQV SGPTVTLSNA NTNTATFIAP
AVSAATPLVF EFKATDDRNK STTAQTTVTV SPAVLGFTAV AKSLDDVVKV PEGYAVSVLY
RLGDPLNAAT SAYANNGTDT GFSARGGDHH DGMHYFGLAA TGSTRDDASN TRGLLVMNHE
NITQVYLHAN GPTSTGGVRP EGEALKEMEA HGVAVVEVGR AGSGAWSYVQ GSALNRRVTP
LTPTLFSGPA RGNALLRTRF SAAGTDGRGT INNCANGFTA WGSYLTCEEN WAGYFRRATG
DDAARGGATA RSVVALKRYG IPEGAGGSYG WASVVPADAA STVYARWDAS ASGAAADGTA
DFRNEPNQFG WVVEIDPYDP TKAPRKRTAL GRFGHEGCWP SAFVAGRKPA FYMGDDSRGE
YLYKFVSAQP WVAADAGATD RLAIGDKYFD AGTLYVAKFN ADGSGTWMPL LFGTGPLTAA
NAAYAFADQA DVLTNARLAA DALGATKMDR PEWTAINPAT GEMYLTLTNN SASVRPLDGT
DAANPRHYND PKGSANTAQR GNPNGHIVRL REAGDTSEAT SFGWDIYLFG ADSADSDPAN
VNLSGLDASN DFSSPDGLWF GRPSNESGQV SPLLWIQTDD GAFTDRTNNQ MLVALPGKVG
DGGAKTITNT GADGSTRTQA TIVGKAATGA TLKRFLVGPK GCEITGIDTT PDGRTLFVNI
QHPGEEGGLA TLQSSWPATQ GGTSSTARPR SATIVITRND GGVVGL