Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2471 |
Symbol | |
ID | 5198060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2743869 |
End bp | 2746067 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640582019 |
Product | TonB-dependent receptor |
Protein accession | YP_001262968 |
Protein GI | 148555386 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCA GCAACTCTGC CGCAAAGGGC GGCGCCATTG AAACTACGCG TGCGCATTTC TTTGCCCACG GCGCGATGAT GGCGCTGGCC GTCGCGAGCG CGGGTTTCTG GAACGCGGCG GCGCATGCAC AGGTCGACAT GGCCGCCCAG GCCGAAGCGG CCGGCGCCGA CGAGATCGTC GTTACCGCCC GCAAGCGGCA GGAAGCGTCG CAGAATGTTC CGCTGTCGGT CGCCGCGTTC AACGGCGAGA TGCTTCAGTC GCGCTCGGTC ACGACCGTTT CCGACATCCA GGGCCTCGTC CCCGGCCTTC ACTATCAGGA GCGCGGCAAT CTCCAGACCG AGCTGACGAT CCGCGGCGTC GGCGGCGACG CCCGCAACCC CGGCATCGAC GCCGGTGTCG GCATGTATAT CGACGGCGCC TATATCCCGC GCACCTCCGG CTATAATGCC GACCTGTCCG ACATCGCCCA GGTCGAAGTG CTTCGCGGCC CGCAGGGCAC CCTGTTCGGC AAGAACACGA TCGGCGGCGT GATCAACATC GTGACGAAAA AGCCGACCGA GGAACTGACC GGTTTCGTCT ATGGCAGCTA CGGCAATTAT GATGCCGTTC GTACCCAGGC GGCGATCTCC GGCGGGCTCG CTCCGGCGCT GTCGGCCAAG GTCACCGTGG CGAGCTGGAA TCGCCAAGGC TATATCCGCA GCCGCGTCCG GAACGAGCGG TTGAACAACG AAGATCGTCT CGGCGGCCGG CTCCAGCTCC GCTACAATCC GGACACGCAG CTCGATGTCA ATTTCTCGGT CGACGGCACG CGCGACCGCC GGCGCGGCGT CCTCAACCAG ATCGGCTCGC CGGCCGGCGC GGCGGCGCCC TATTTCACCG GCAACCGCTT CGTGATGGAT GCGGATCAGC GCAACAGCGA CGCCCGCGAC ATGTGGGGCA TGACGCTGGG CATCGATTAT GTCCTGGCCA ACGACATGAC GATCACGTCG GTCACCGCCT ATCGGGACAT CGATATCCTG GTCTACAGCG ACATCGACCA GACCCCGCTC GACCTGTTCC ACTCGGGGCC GTTTACCGAC GACACGACGA TGATCAGCCA GGAATTGCGG CTCGTTTCGC CGGGCAACAA GCCGTTCCGC TACGTGCTGG GCCTCTTCGG CTACAAGCAG GACATCGACT CCGACCGCGA CATCTTCATC AACGGCGCCC GCTCGATCGT CCTCGATACG GCGGCCAATA CCGACAGCTA TGCGGCCTTC GGCAACTTCG ACTATGATCT GACCAGTCAG CTGACCGCCA CGGTCGGCCT GCGCTATTCG ATCGACAAGA AGGACGGCAA GTTCAACCAG CAGCGAACGG GACTGGACTA TGCGATCCCG CTCAAGCGGA CCGACAAGAA CCTCTCCTGG ACGGGCAGCC TGCTCTACAA GATCACGCCG CGCCTCAGCA CCTATGCCAC GGTTTCGCGG GGCTTCAAGG CGGGCGGATT CAACCTCGAT ACCGCTGGTG CGGTCGGCCT CACGGCATCG GACCTGAACT TCCTGCCGGA GCGGGTGACC AATTACGAGG TCGGCCTGAA GGGCCGCGCG ACCGACTGGA TGCGCTTCTC GCTCGCCGTC TTCCAGATGG ACTACAAGAA CAAGCAGGTT TCCCAGTTCG TCAATCCGCC GGTCGGCAAT GTGCCCGTCG TGCTGGTCAC CAATGCCGGG CAGGCGCGGA TCAAGGGTGT CGAGTTCGAC ACGACGCTGA CCCCGGTGCA CGGCCTGTCG CTGTCGGGCA ACGTCAGCTA TCTCGATGCC AAATACCGGT CCTTCCCGAA CGCCGCCGTG GTAGGGGGCG TGCTCGTCTC CTACACCGGC AACAGGGTGG AGCGGACCCC GAAGTGGACC GCCGGCGGCA GCATCGACTA TCGCCATCCG ATCGGCAGCG GCGATCTCGT GATGGGCGCC AACGTCTCGT ACAACGGCGC GGTCGATCTC CAGCCGGACA ACCTGCCGCG CAACTATGAA GGGTCCTACA CGCTGGTCGA CGCCCGGTTC GGCTATGAGA TGGCCGACGG CAAATGGGGC CTGTATCTCT GGGGCAAGAA CCTCACCAAG GAGAACTTCG CGACCTTCAA GCGCCAGTTC GCCGGTCTCG ATCAGGTGGC CTATGGGGCG CCGAGAACCT ATGGGGTGGA AGCTCGCTTC AAGTTCTGA
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Protein sequence | MKLSNSAAKG GAIETTRAHF FAHGAMMALA VASAGFWNAA AHAQVDMAAQ AEAAGADEIV VTARKRQEAS QNVPLSVAAF NGEMLQSRSV TTVSDIQGLV PGLHYQERGN LQTELTIRGV GGDARNPGID AGVGMYIDGA YIPRTSGYNA DLSDIAQVEV LRGPQGTLFG KNTIGGVINI VTKKPTEELT GFVYGSYGNY DAVRTQAAIS GGLAPALSAK VTVASWNRQG YIRSRVRNER LNNEDRLGGR LQLRYNPDTQ LDVNFSVDGT RDRRRGVLNQ IGSPAGAAAP YFTGNRFVMD ADQRNSDARD MWGMTLGIDY VLANDMTITS VTAYRDIDIL VYSDIDQTPL DLFHSGPFTD DTTMISQELR LVSPGNKPFR YVLGLFGYKQ DIDSDRDIFI NGARSIVLDT AANTDSYAAF GNFDYDLTSQ LTATVGLRYS IDKKDGKFNQ QRTGLDYAIP LKRTDKNLSW TGSLLYKITP RLSTYATVSR GFKAGGFNLD TAGAVGLTAS DLNFLPERVT NYEVGLKGRA TDWMRFSLAV FQMDYKNKQV SQFVNPPVGN VPVVLVTNAG QARIKGVEFD TTLTPVHGLS LSGNVSYLDA KYRSFPNAAV VGGVLVSYTG NRVERTPKWT AGGSIDYRHP IGSGDLVMGA NVSYNGAVDL QPDNLPRNYE GSYTLVDARF GYEMADGKWG LYLWGKNLTK ENFATFKRQF AGLDQVAYGA PRTYGVEARF KF
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