Gene Swit_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2468 
Symbol 
ID5198057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2740987 
End bp2741685 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID640582016 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_001262965 
Protein GI148555383 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG CCTGCCCGGA GGTGCCCATG TTCCAAATAA ATCCCCTGCC TGCTCAACTT 
GCTTCCACGC TGGTCGAACG GGCCCTGCTC GCCGAACCGG CGGTCGTCGG CCACTTCCGG
CTGATGGGTT TCCCCGACGG CGGCATCCAG CCGCAGATCG AGTCCGGCCG TATCGCGGGC
ACCGCCGTCA CGCTCGCCCT GCCCGGTGCG GATTCGGCGC TGCTCCATCA CGTCGCATCG
ACGCTGCGCC CCGGCGACGT CCTGGTCATC GATCGGCTGG GCGACAAGAC CCATGCCTGT
CTCGGCGGCG GCGTCGCCTT CGCCCTCAAG CAGCGTGGCA TAGCGGGGAT CGTGATCGAT
GGCCCCGCGG CCGATCCGGC GGAACTGCGC GAGCATGGCG TGCCGATCTG GTCCCGCGGC
CTGTCCGCGA TCACGACCCG CACCTATGCG GTCGGCGGGG CCTTCAACAT TCCGGTATCG
ATCGGCGGCG CGGTGGTCCA GCCGGGGGAT CTGGTGATCG CCGACGAAGG CGGCATCGTC
TTCATCCCGC CCGCCGAGGC TTCGAACGAT GTCGAGCGCG CGATCCGGAT GATCGAGGGC
GAGCGGCAGG GCATGGGCCT GATCGCCGAC GGCAAACCGC TGGGCGCCCT GAGCGGTGCG
ACGGCCCTGG TCGAAAAGGC CGTCGCGCCC GCAGGCTGA
 
Protein sequence
MTPACPEVPM FQINPLPAQL ASTLVERALL AEPAVVGHFR LMGFPDGGIQ PQIESGRIAG 
TAVTLALPGA DSALLHHVAS TLRPGDVLVI DRLGDKTHAC LGGGVAFALK QRGIAGIVID
GPAADPAELR EHGVPIWSRG LSAITTRTYA VGGAFNIPVS IGGAVVQPGD LVIADEGGIV
FIPPAEASND VERAIRMIEG ERQGMGLIAD GKPLGALSGA TALVEKAVAP AG