Gene Swit_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2466 
Symbol 
ID5200197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2739161 
End bp2740096 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID640582014 
ProductLysR family transcriptional regulator 
Protein accessionYP_001262963 
Protein GI148555381 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC GGTTTCTCGA GACGTTCGTT TGGCTCTCCC GCCTGAAGAG CTTCAACCGG 
ACGGCCGAAA GACTCCATAC CAGCCAGCCT GCCATATCGG CGCGCATCGT CACGCTCGAG
GACCTGCTCG GCGTGCCGCT GTACGAACGG CAGGCCAAGG GGTTCGAACT GACCCCCGCC
GGGCGGCGCA TCATCGAACG GTGCGAGAAG ATCGTCGCGC TGACCAATGA CCTCAAGCAG
ATGGTCCATG ATGACGATTT TCTCGATCGT CCGCTGCGGG TCGGTAGCGC GGATATCGTG
ACGCTGACCT GGTTGCCGGC TTTCCTGAGC CGCATCCAGG CCGATCTGCC CAAGCTCAAC
CTCGAGCTCA TCACGGATTC GGGCATCAAT TTGGCGAACG CCCTGCTGGC GGACGAACTC
GATATGGCCT TCATGGTCGA GGGGCTCGAC GAGTCCAGGA TCGTCAACGC GCCGCTGTGC
AACTATCGGG TCGACTGGCT CTGCTCGTCC GGTCGGACGG ACATTCCGGA GGGGCTGACG
GTCAAGGACC TCTGCGACCT GCCGATCATC ATGCCGCCAG CCGATACCGC CGGTTACCGC
TGGCTGTGTG AATATTTCAA ACGGCACAAT CCGCAGTTCG ACCCGCAGGC AGCCGACGGG
CATCGGGTGC AATGCGGCTA TTCGCCCGCT ACCGGGGTGG AGATGGTCGC GCGCGATCTG
GGCATCGCCG CGATCCCGAC CTTGCTGGCG CGCCGGCATA TCGACCGCGA GGAGATCCGC
GTCCTGAATG TGCGCGAAGC CTTTCCGAAC TGGAGCGTCG TCGCTTGCTA CAAGGCGCCG
CCGACGATCT CCTCCCTGTT CCGCATCGTC GAGATCGCCC AGGAGGAAAC CAAGCTTTTC
GCGGAAGGGA TTGGCGAGAA GGATATGTGG CCCTGA
 
Protein sequence
MNTRFLETFV WLSRLKSFNR TAERLHTSQP AISARIVTLE DLLGVPLYER QAKGFELTPA 
GRRIIERCEK IVALTNDLKQ MVHDDDFLDR PLRVGSADIV TLTWLPAFLS RIQADLPKLN
LELITDSGIN LANALLADEL DMAFMVEGLD ESRIVNAPLC NYRVDWLCSS GRTDIPEGLT
VKDLCDLPII MPPADTAGYR WLCEYFKRHN PQFDPQAADG HRVQCGYSPA TGVEMVARDL
GIAAIPTLLA RRHIDREEIR VLNVREAFPN WSVVACYKAP PTISSLFRIV EIAQEETKLF
AEGIGEKDMW P