Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2466 |
Symbol | |
ID | 5200197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2739161 |
End bp | 2740096 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640582014 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001262963 |
Protein GI | 148555381 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAC GGTTTCTCGA GACGTTCGTT TGGCTCTCCC GCCTGAAGAG CTTCAACCGG ACGGCCGAAA GACTCCATAC CAGCCAGCCT GCCATATCGG CGCGCATCGT CACGCTCGAG GACCTGCTCG GCGTGCCGCT GTACGAACGG CAGGCCAAGG GGTTCGAACT GACCCCCGCC GGGCGGCGCA TCATCGAACG GTGCGAGAAG ATCGTCGCGC TGACCAATGA CCTCAAGCAG ATGGTCCATG ATGACGATTT TCTCGATCGT CCGCTGCGGG TCGGTAGCGC GGATATCGTG ACGCTGACCT GGTTGCCGGC TTTCCTGAGC CGCATCCAGG CCGATCTGCC CAAGCTCAAC CTCGAGCTCA TCACGGATTC GGGCATCAAT TTGGCGAACG CCCTGCTGGC GGACGAACTC GATATGGCCT TCATGGTCGA GGGGCTCGAC GAGTCCAGGA TCGTCAACGC GCCGCTGTGC AACTATCGGG TCGACTGGCT CTGCTCGTCC GGTCGGACGG ACATTCCGGA GGGGCTGACG GTCAAGGACC TCTGCGACCT GCCGATCATC ATGCCGCCAG CCGATACCGC CGGTTACCGC TGGCTGTGTG AATATTTCAA ACGGCACAAT CCGCAGTTCG ACCCGCAGGC AGCCGACGGG CATCGGGTGC AATGCGGCTA TTCGCCCGCT ACCGGGGTGG AGATGGTCGC GCGCGATCTG GGCATCGCCG CGATCCCGAC CTTGCTGGCG CGCCGGCATA TCGACCGCGA GGAGATCCGC GTCCTGAATG TGCGCGAAGC CTTTCCGAAC TGGAGCGTCG TCGCTTGCTA CAAGGCGCCG CCGACGATCT CCTCCCTGTT CCGCATCGTC GAGATCGCCC AGGAGGAAAC CAAGCTTTTC GCGGAAGGGA TTGGCGAGAA GGATATGTGG CCCTGA
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Protein sequence | MNTRFLETFV WLSRLKSFNR TAERLHTSQP AISARIVTLE DLLGVPLYER QAKGFELTPA GRRIIERCEK IVALTNDLKQ MVHDDDFLDR PLRVGSADIV TLTWLPAFLS RIQADLPKLN LELITDSGIN LANALLADEL DMAFMVEGLD ESRIVNAPLC NYRVDWLCSS GRTDIPEGLT VKDLCDLPII MPPADTAGYR WLCEYFKRHN PQFDPQAADG HRVQCGYSPA TGVEMVARDL GIAAIPTLLA RRHIDREEIR VLNVREAFPN WSVVACYKAP PTISSLFRIV EIAQEETKLF AEGIGEKDMW P
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