Gene Swit_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2447 
Symbol 
ID5196494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2716971 
End bp2718026 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content71% 
IMG OID640581994 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001262944 
Protein GI148555362 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.537273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTT TGTTCGATCC CATCCGCCTC GGCGCCATCG AGGCGCGCAA CCGCATCATC 
ATGGCCCCGC TCACCCGCGC GCGGGCGACG CGCGCGGCGG TGCCGGTGCC GATCATGGCG
GAATATTATG CGCAGCGCGC CTCGGCCGGG CTGATCATCA GCGAGGCGAC CGGGATCAGC
CGCGCCGGGC TCGGCTGGCC GCATGCGCCC GGCATCTGGA ACGAGGAGCA GGTCGCGGCC
TGGCGGCCGG TGACCGACGC GGTCCACGCC GCCGGCGGAC GGATCGTCAG CCAGCTCTGG
CATATGGGCC GCGTCGTCCA TCCGTCGGTC AGCGGGCAGC AGCCGGTCTC CGCCTCGGCG
ATCACCGCGC CCGACCTCGC CATGACCTAT GAGGGCGACC AGCCCTATAC CGAGCCCCGG
CCTCTGCGGA TCGACGAGGT GCCTGCGCTG CTCGACGACT ATGCGCGGGC GGCGCGCAAC
GCGATCGCGG CGGGTTTCGA CGGGGTGCAG ATCCACGCCG CGAACGGCTA TCTGATCGAC
CAGTTCCTGC GCGATTCGTC GAACCGCCGC ACCGACATCT ATGGCGGGTC GATCGAGAAC
CGCACCCGCC TGCTGGGCGA GGTGACGCGC GCCGTGGTCG ACGCGGTCGG CGCCGAGCGG
ACCGGGGTGC GGCTGTCGCC CAACGGCGTC ATCCAGGGTG TCGACGACAG TGATCCCGAG
CCGCTGTTCA CCGCGGCGGC GGCGCTGCTG TCCGACATCG GCATCGCCTT CCTCGAGATT
CGCGAGCCGA GCGGGCTCGA CCATCCCCCG GTCGGGCCGG CGATGCGGCG CGCCTTCGAC
GGGCCGTTCA TCGTCAATGC CGGCTATGAC GCGGCGGGCG CGCAGGCCGC GCTCGACAGC
GGGGCGGCCG ATGCGGTCAG CTTCGGCAAG CCGTTCATCG CCAATCCCGA CCTGCCGCAA
CGCTTCAGCA AGGGCCTGCC GATCCTGCGG GCCGACGTCG CGACCTTCTA CGCGCAGGGG
CCGGAGGGCT ATATCGACTA TCCCAGCGCG GCGTAG
 
Protein sequence
MPTLFDPIRL GAIEARNRII MAPLTRARAT RAAVPVPIMA EYYAQRASAG LIISEATGIS 
RAGLGWPHAP GIWNEEQVAA WRPVTDAVHA AGGRIVSQLW HMGRVVHPSV SGQQPVSASA
ITAPDLAMTY EGDQPYTEPR PLRIDEVPAL LDDYARAARN AIAAGFDGVQ IHAANGYLID
QFLRDSSNRR TDIYGGSIEN RTRLLGEVTR AVVDAVGAER TGVRLSPNGV IQGVDDSDPE
PLFTAAAALL SDIGIAFLEI REPSGLDHPP VGPAMRRAFD GPFIVNAGYD AAGAQAALDS
GAADAVSFGK PFIANPDLPQ RFSKGLPILR ADVATFYAQG PEGYIDYPSA A