| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2443 |
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| Symbol | |
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| ID | 5196688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2713537 |
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| End bp | 2714478 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 640581990 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001262940 |
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| Protein GI | 148555358 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.879557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGG CCGTGGCCCT TGCGGGGCGC GGCCGGGGGC GGACCGCGCC CAATCCCAAT
GTCGGCTGCG TCATCGTCCG CGACGGGCGG GTGATCGGGC GCGGCTGGAC CGGCGCGGGC
GGCCGCCCCC ATGCCGAGGC GATCGCGATC GAGGCCGCCG GCGACCTGGC TGGCGCGACG
CTCTACGTCA CCCTCGAACC CTGCGCCCAT GTCTCGGCGC GCGGTCCCGC CTGCGCCGAC
CTGATCGTCG CGGCGAAGCC GGCGCGCGTG GTGATCGCGC TGCGCGATCC CGATCCGCGC
ACCGATGGGC GCGGCATCGC CCGGATCACA GCGGCAGGGA TCGCCGTCGC CACCGGGGTC
GAGGCCGAGG CCGCCCGCGC GTCGATGGCC GGCTTCCTGA CGCGCCGATC GAAGGGCCGC
CCGCACGTCA CGCTCAAGCT CGCCACCTCG CTCGACGGGC GGATCGCGCT GCCCGACAGG
TCGAGCCGCT GGATCACCGG CCCCGCCGCC CGCGCCCACG CCCATCTCGA ACGCGCCCGG
CACGAGATGA TCCTGGTCGG GCGCGGCACG CTGGAGGCCG ATTCGCCCGG GCTCGACGTC
CGCCTGCCCG GCCTCGAAGA GCGCAGCCCG CGCCGCGCGG TGCTCGGCCA TGGCGCGGCG
CCCGAGGGCT GGACGGCGCT GCGCGACCCG GCCGACATCG CCGGCCTCGA CGGGGTCGAC
CATCTGTTCG TCGAGGGCGG GGCGGGCGCC GCCGCCGCCT TCCTCGCCGC CGACCTGGTC
GACCGGCTGC TGCTCTACAC CGCGCCGATC GTCGTCGGCG CCGGCCGCTC CGCGATCGGC
GACATCGGGC TGGCCGACCT CGCCGCCGCG CACGATCGCT GGCGGCTCGC CGACACGCGG
ACGCTTGGCA TCGACAGGCT CTGCGTTTAC GAGCGGGCCT GA
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| Protein sequence | MLSAVALAGR GRGRTAPNPN VGCVIVRDGR VIGRGWTGAG GRPHAEAIAI EAAGDLAGAT
LYVTLEPCAH VSARGPACAD LIVAAKPARV VIALRDPDPR TDGRGIARIT AAGIAVATGV
EAEAARASMA GFLTRRSKGR PHVTLKLATS LDGRIALPDR SSRWITGPAA RAHAHLERAR
HEMILVGRGT LEADSPGLDV RLPGLEERSP RRAVLGHGAA PEGWTALRDP ADIAGLDGVD
HLFVEGGAGA AAAFLAADLV DRLLLYTAPI VVGAGRSAIG DIGLADLAAA HDRWRLADTR
TLGIDRLCVY ERA
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