| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2431 |
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| Symbol | rplT |
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| ID | 5196448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2703262 |
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| End bp | 2703639 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581978 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001262928 |
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| Protein GI | 148555346 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.500057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.976562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCG TCAAGCGCGG TACGACCACC CACGCCAAGC ACAAGAGGAT TCTTGGCGCG
GCGAAGGGCT ATTATGGCCG CCGCAAGAAC ACCATCCGCA TCGCGCGTCA GGCCGTCGAG
AAGGCCGGCC AGTACGCCTA TCGCGACCGC AAGGTTAAGA AGCGCTCGTT CCGCGCGCTC
TGGATCCAGC GCATCAACGC CGCTGTCCGC GCCGAAGGCC TGACCTACGG CGTGTTCATG
CACGGCCTGA AGCTGGCGGG CATCGAGCTG GACCGGAAGG TCCTGGCAGA CATCGCCATG
CACGAGGGCG AGGCCTTTAG CGGCATCATC GCCCAGGCCA AGGCCGCCCT CCCCGAAGGC
GCCCGCATCG CGGCGTAA
|
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| Protein sequence | MARVKRGTTT HAKHKRILGA AKGYYGRRKN TIRIARQAVE KAGQYAYRDR KVKKRSFRAL
WIQRINAAVR AEGLTYGVFM HGLKLAGIEL DRKVLADIAM HEGEAFSGII AQAKAALPEG
ARIAA
|
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