Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2413 |
Symbol | |
ID | 5196205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2681701 |
End bp | 2682180 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640581959 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001262910 |
Protein GI | 148555328 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.17098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAAA CGCTGACGCC GATCGACATC AAGATATTGG AGCAGGTGCA GAAGGACGCC GCGCTGTCGA CGACCGAGCT GGCCGAGCGG GTCGGCCTGT CGCAATCGCC CTGCTGGCGC CGGCTCCAGC GGCTGCGCGA GGAAGGCTAT ATCGTCGGCC AGGTCGCGGT GCTCGACCGC AGGAAGTTCG GCGAGAGCCT CTACATCTTC GCGACGCTCA AGATGGTGAC GCTGAGCGAC GAGCAGCGCG CCGAGTTCAA CCGCAAGATC GAGAACACGC CCGAGATCAT GGAGTGCCAC ACGATCTTCG GCGAGCGCGA CGTGCTGCTC AAGATCATCG CGGAATCGCT CGACTGGTAT CAGAAGTTCA TCTTCCGGGT GATCCTGAAG CTGCCCGGCG TGCAGGACGT CCAGTCGACC GTGACGCTGT CGGAGATCAA GCAGACGACC GCGATCCCGG TCCGCAAGAC CCGCCTCTGA
|
Protein sequence | MTETLTPIDI KILEQVQKDA ALSTTELAER VGLSQSPCWR RLQRLREEGY IVGQVAVLDR RKFGESLYIF ATLKMVTLSD EQRAEFNRKI ENTPEIMECH TIFGERDVLL KIIAESLDWY QKFIFRVILK LPGVQDVQST VTLSEIKQTT AIPVRKTRL
|
| |