Gene Swit_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2413 
Symbol 
ID5196205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2681701 
End bp2682180 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID640581959 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001262910 
Protein GI148555328 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.17098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CGCTGACGCC GATCGACATC AAGATATTGG AGCAGGTGCA GAAGGACGCC 
GCGCTGTCGA CGACCGAGCT GGCCGAGCGG GTCGGCCTGT CGCAATCGCC CTGCTGGCGC
CGGCTCCAGC GGCTGCGCGA GGAAGGCTAT ATCGTCGGCC AGGTCGCGGT GCTCGACCGC
AGGAAGTTCG GCGAGAGCCT CTACATCTTC GCGACGCTCA AGATGGTGAC GCTGAGCGAC
GAGCAGCGCG CCGAGTTCAA CCGCAAGATC GAGAACACGC CCGAGATCAT GGAGTGCCAC
ACGATCTTCG GCGAGCGCGA CGTGCTGCTC AAGATCATCG CGGAATCGCT CGACTGGTAT
CAGAAGTTCA TCTTCCGGGT GATCCTGAAG CTGCCCGGCG TGCAGGACGT CCAGTCGACC
GTGACGCTGT CGGAGATCAA GCAGACGACC GCGATCCCGG TCCGCAAGAC CCGCCTCTGA
 
Protein sequence
MTETLTPIDI KILEQVQKDA ALSTTELAER VGLSQSPCWR RLQRLREEGY IVGQVAVLDR 
RKFGESLYIF ATLKMVTLSD EQRAEFNRKI ENTPEIMECH TIFGERDVLL KIIAESLDWY
QKFIFRVILK LPGVQDVQST VTLSEIKQTT AIPVRKTRL