Gene Swit_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2406 
Symbol 
ID5196901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2674134 
End bp2674919 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID640581952 
Productchromosome partitioning ATPase 
Protein accessionYP_001262903 
Protein GI148555321 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.443205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATG TCCCGCCCGA GCCTGTCGAG CCGGCGGCGC CCGTGCCCGG CGACGCCGAT 
CGCGTGACCG GCTTCGAGAA GCTGCGCGAG ACCGGCATCT ACGGCTTCGA CAGCCGCGAC
GTGCGCTCGC GCCCCTTCAC CCTGCTGCGG GCGCAGCTCC TCCGCATCGC GCGGGCGCGC
GGCTGGCGGA TCATCGGCAT CACCTCGCCG ACGCCGAAGG TGGGCAAGAG CTTCGTCGCG
TCCAACCTCG CCGCGGCGCT CGCCCGGACG CCGGACCTCC ACACCTATCT GTTCGACTTC
GACCTGCGCC GCTCGACCAT CGCCGGCAAT TTCGGGCTGA AGGGCGAGGT CGGCGTCTCG
CACTATCTCG ACGGGACGAT CAACGACCTG CGGCAGGTGG CGCGCACCAT CCCGGGCGAG
CAGCTCACCA TCTTCCCCAG CTATCGCAAT GCCGCCGCGT CGGACGAGCT GATGGCGTCG
ACCCGGATGG ATTCGCTGAT CGCGGCGATG CGCCAGCTCC CCGAGAACAG CCTGTGCCTG
TGCGATCTGC CGCCGGTCTT CGCCAATGAC GACGCGGTCA TCGTCAGCCA GAAGATCGAC
GCCTATCTGA TGGTGGTCGA GGATGGCGTC ACCACCCGCA AGCAGGTCCG CGACAGCTTC
CGGCTGCTCA CGCCGGCACC GTGCATCGGC ACCGTCCTCA ACCGCTACAG CGCCGGCTTC
GCCGCCGACG ACTATGGCTA TGGCTATGGC CAGGCCAAGC GCTATGGGGG CTATTACAAC
GATTGA
 
Protein sequence
MSYVPPEPVE PAAPVPGDAD RVTGFEKLRE TGIYGFDSRD VRSRPFTLLR AQLLRIARAR 
GWRIIGITSP TPKVGKSFVA SNLAAALART PDLHTYLFDF DLRRSTIAGN FGLKGEVGVS
HYLDGTINDL RQVARTIPGE QLTIFPSYRN AAASDELMAS TRMDSLIAAM RQLPENSLCL
CDLPPVFAND DAVIVSQKID AYLMVVEDGV TTRKQVRDSF RLLTPAPCIG TVLNRYSAGF
AADDYGYGYG QAKRYGGYYN D