| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2399 |
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| Symbol | |
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| ID | 5196809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2666057 |
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| End bp | 2668765 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581945 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_001262896 |
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| Protein GI | 148555314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.561826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCTCCG CGCCCACCTC GAACGACAAC GCTAGAAAAG GCCGGGCGGC CCACCCCCGG
CCCCTCCCGC AAGCGGGAGG GGGGAACAAA GGCAAGACGA TGACCACCGC CTCCACCACC
CAGTTCGTCA ACATCGGCGA GCGCACCAAC GTCACCGGGT CGGCCGCCTT CAAGAAGCTG
ATCATGGGCG GCGACTATGC CAAGGCGGTC GAGGTCGCGC GGCAGCAGGT CGAGAACGGC
GCGCAGATCG TCGACGTCAA CATGGACGAA GGCCTGCTCG ACGCCGAGCT GGCGATGACG
ACCTTCCTCA AGCTGATCGC CGCCGAGCCC GACATCGCGC GGGTGCCGGT GATGATCGAC
AGCTCGAAAT GGTCGGTGAT CGAAGCCGGG CTGAAATGCG TATCGGGCAA GCCGATCGTC
AACTCGATCA GCATGAAGGA GGGCGAGGAG GCCTTCCTGG CGCAGGCGCG CAAGTGCCGG
GCCTATGGCG CCGCCGTCGT GGTGATGGCG TTCGACGAGG TCGGACAGGC CGACACGAAG
CAGCGCAAGG TCGATATCTG CGAGCGCGCC TACAAGCTGC TGGTCGGCGA CGGCTTCGCG
CCCGAGGACA TCATCTTCGA TCCGAACATC TTCGCGGTCG CGACCGGGAT CGACGAGCAT
CGCCGCTACG CGATCGACTT CATCGAGGCG ACCGCCGAGA TCAAGAAGCG CTGCCCGCAC
TGCCACATCT CGGGCGGCGT ATCGAACCTC AGCTTCTCCT TCCGCGGCAA CGAGCCGGTG
CGCCGCGCGA TGCACAGCGT GTTCCTCTAC CACGCGATCC AGGCGGGGAT GGACATGGGC
ATCGTCAACG CCGGCCAGCT CGACGTCTAC GACGCGATCG ATCCGGTGCT GCGCGAGGCG
TGCGAGGACG TGATCTGGGA CCGGCGGCCA AAGAACGGAG GCGACGCGAC CGAGCGGCTG
ATCGAGCTCG CCGAAAGCTT CAAGGGCAAG GACGCCGCCG CCGAGAAGGC GGCCGAGGAA
TGGCGCGGCT GGGACGTCGC CAAGCGGCTC GAACATGCGC TGGTCAAGGG CATCGACGCG
CATGTCGTCG ACGATACCGA GGAGGCCCGC CAGCATTTCG CCCGGCCGAT CGAGGTGATC
GAAGGGCCGC TGATGGACGG GATGAACGTC GTCGGCGACC TGTTCGGATC GGGCAAGATG
TTCCTGCCGC AGGTGGTCAA GTCCGCCCGG GTGATGAAGA AGGCGGTCGC CTATCTGCTG
CCCTATATCG AGGCCGGGAA GGTGCAGGGC GAGCGGTCCA AGGGCAGGAT CGTCATGGCC
ACCGTCAAGG GCGACGTCCA CGACATCGGC AAGAACATCG TCGGCGTGGT GCTCCAGTGC
AACGGCTATG AGGTCATCGA CCTCGGCGTG ATGGTGCCGT GGACCGACAT CCTCAGGGCC
GCGAACGAGA ATGACGCCGA CATCATCGGC CTGTCGGGGC TGATCACCCC CTCGCTCGAC
GAGATGGTGA CCGTCGCGAC CGAGATGGAC CGCGCGAAGA TGCAGCTTCC GCTGATGATC
GGCGGCGCCA CCACCTCGAA GGTCCATACC GCGCTGCGGA TCGCGCCGGC CTATGCCGGG
CCGGTCATCC ACGTCCTCGA CGCCAGCCGC GCGGTGGGCG TCGCCTCGAC CCTGTTGTCG
GACACGCAGC GCGACGATTT CGTGGCGAAG ACGGCGGCCG ACTACGAGGC GGTGCGCAAG
GCGCGCGAAG GCAAGGGGCA GAACGAGCTG GCGACGATCG AGGAGGCGCG CGCCAACGCC
TTCGTCGCCG ATTTCGCGCT CAAGCCCGAC GCCCCGAAGC AGCCCGGCAC CCATGTCTTC
ACCGACTGGC CGCTCGAGGA CCTGCGCGAG ATCATCGACT GGACCCCCTT CTTCCGCGCC
TGGGAACTGG CCGGCAACTA TCCCGCGATC CTCGACGACG CGGTGGTGGG GGAGAGCGCG
CGCGGCCTGT TCGCCGACGC GCAGAAGATG CTCGACCAGA TCATCGCCGA GAAATGGCTG
ACCGCGAAGG GCGTCGCGGC GCTGTGGCCG GCGCATGCCG ATGGCGACGA CGTGATCGTC
CGGGCCGATA GCGGCGAGGT CCGCCTGCCC TTCCTGCGCC AGCAGATCAA GAAGCGCGAG
GGGCGGGCGA ACATGTGCCT GGCCGACTTC GTCGCGCCGG CCGACGACTG GCTGGGCGGC
TTCGCGGTCG GCATCCACGG CATCGATCCG CACATCGCGC GGTTCAAGGC CGACCATGAC
GACTATCGCG ACATCCTGCT CAAGGCGCTC GCCGACCGCC TCGCCGAGGC CTTCGCCGAG
CGGCTCCACC TCCATGTCCG CACCACCCTG TGGGGCTATG CCGAGGGCGA GCAGCTCACC
AACGAGGCGC TGATCAAGGA GCAGTATCGC GGCATCCGCC CGGCGCCCGG CTACCCGGCC
TGCCCCGACC ACAGCCAGAA GCCGATCCTG TTCGACCTGC TGAAGGCGGG CGACGCGACC
GGCATCACCC TGACCGAGAG CTTCGCGATG CTGCCGACGG CGGCGGTGTC GGGCTTCTAT
TTCGGCCATC CCGAGGCGAG CTATTTCGGC GTCGCGCGGA TCGGCCGCGA CCAGCTCGAG
GACTATGCCG CGCGCCGCGC GATCGACCTC GCCACGGCGG AGCGCTGGCT GCGGCCGAAC
CTGGATTAG
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| Protein sequence | MGSAPTSNDN ARKGRAAHPR PLPQAGGGNK GKTMTTASTT QFVNIGERTN VTGSAAFKKL
IMGGDYAKAV EVARQQVENG AQIVDVNMDE GLLDAELAMT TFLKLIAAEP DIARVPVMID
SSKWSVIEAG LKCVSGKPIV NSISMKEGEE AFLAQARKCR AYGAAVVVMA FDEVGQADTK
QRKVDICERA YKLLVGDGFA PEDIIFDPNI FAVATGIDEH RRYAIDFIEA TAEIKKRCPH
CHISGGVSNL SFSFRGNEPV RRAMHSVFLY HAIQAGMDMG IVNAGQLDVY DAIDPVLREA
CEDVIWDRRP KNGGDATERL IELAESFKGK DAAAEKAAEE WRGWDVAKRL EHALVKGIDA
HVVDDTEEAR QHFARPIEVI EGPLMDGMNV VGDLFGSGKM FLPQVVKSAR VMKKAVAYLL
PYIEAGKVQG ERSKGRIVMA TVKGDVHDIG KNIVGVVLQC NGYEVIDLGV MVPWTDILRA
ANENDADIIG LSGLITPSLD EMVTVATEMD RAKMQLPLMI GGATTSKVHT ALRIAPAYAG
PVIHVLDASR AVGVASTLLS DTQRDDFVAK TAADYEAVRK AREGKGQNEL ATIEEARANA
FVADFALKPD APKQPGTHVF TDWPLEDLRE IIDWTPFFRA WELAGNYPAI LDDAVVGESA
RGLFADAQKM LDQIIAEKWL TAKGVAALWP AHADGDDVIV RADSGEVRLP FLRQQIKKRE
GRANMCLADF VAPADDWLGG FAVGIHGIDP HIARFKADHD DYRDILLKAL ADRLAEAFAE
RLHLHVRTTL WGYAEGEQLT NEALIKEQYR GIRPAPGYPA CPDHSQKPIL FDLLKAGDAT
GITLTESFAM LPTAAVSGFY FGHPEASYFG VARIGRDQLE DYAARRAIDL ATAERWLRPN
LD
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